Gene
| Gene Model ID | pfu_aug1.0_2070.1_44224 |
|---|---|
| Locus | scaffold2070.1 : 12246 ... 15808 : + |
| To GenomeBrowser | scaffold2070.1:12246..15808 |
| Genes list of scaffold | scaffold2070.1 |
| Synonym | pfu_aug2.0_266.1_20533 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2070.1_44224.t1 | 1 | 1 | DUF2315 | 2 | 103 | 1.2e-27 | 96.2 | 2.9e-31 | 1.4e-27 | 96.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2070.1_44224.t1 | gi|254540092|ref|NP_001156860.1| | apoptogenic protein 1, mitochondrial isoform 1 [Mus musculus] | 5.0e-18 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2070.1_44224.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2070.1_44224.t1 atgattggtccggctcatccggagtccaacatccgggcaatcaaattacacataccagataatgaatcagccaatcacaa acgttatagagagatgagacaagaagcgcatcagtggaaccatctattttgggcaaaacacaacagaacctttttccagc aaaaagaggaatatgttaaaatgaaactagctgagaagaaacaaaagtatggaccagatgctgatcaaacactcacacca gaggaactgtccgagttttaccagcggttccttaacgagaactactccgcacataaacagtataatagaataaaggatgg ggaatattccaatctgaccgagggtttacagccttttcgtttggaaaattactcgtga |
|
Protein
| Protein ID | pfu_aug1.0_2070.1_44224.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2070.1_44224.t1 MIGPAHPESNIRAIKLHIPDNESANHKRYREMRQEAHQWNHLFWAKHNRTFFQQKEEYVKMKLAEKKQKYGPDADQTLTP EELSEFYQRFLNENYSAHKQYNRIKDGEYSNLTEGLQPFRLENYS |
|