Gene
| Gene Model ID | pfu_aug1.0_2070.1_44225 |
|---|---|
| Locus | scaffold2070.1 : 21846 ... 28705 : - |
| To GenomeBrowser | scaffold2070.1:21846..28705 |
| Genes list of scaffold | scaffold2070.1 |
| Synonym | pfu_aug2.0_266.1_20532 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2070.1_44225.t1 | 1 | 1 | ZU5 | 219 | 308 | 2.5e-15 | 56.0 | 5.9e-19 | 4.4e-15 | 55.2 |
| pfu_aug1.0_2070.1_44225.t1 | 1 | 1 | Death | 537 | 600 | 6.4e-06 | 25.8 | 1.9e-09 | 1.4e-05 | 24.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2070.1_44225.t1 | gi|160358942|sp|Q6R653.2|UN5CL_MOUSE | UNC5C-like protein | 4.0e-24 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2070.1_44225.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2070.1_44225.t1 atgtacactaaacgaggcaactttcggaaaggatacgtggtcaccgccctgtcttttctgacgaggtatgagaaagctcg tcataaagtggcaggcattgcagttcttggagtaatcctcctcatagttgttgtagttttagtatttttgacttgttgtg gatggctgttactgaggaagcaacatgacaagatctctgaactagaagaaaatctagatggcttaaggaaaatatttaac gtcaaaaacagtacgtttgataatccatgcaaggatggttttgattatatcaatgagatcgatagtggggagccagcgag accagagtcaggggatagtggacagtccggagggagtggacacagaggatttaattacacaatggttgtggctgaaaagg taaaaacggtgaatacaaacataccccagcatgtaagccagcttatcaggactgcagagttggcctatcatggtgatgct gtgacaaaaagagatctgatgctggacagaattgatataaaatcccctaataaaggtatatcaccaatatcagctgcatc taaacgtcatacgatatttcaaggtcgtcctacgtcatacttgatgtcaggtgacaacgatagcagcgaattacttcaaa agaaaggcacctttgttcacaagatggtgaatgaagcaggtgatattcttaatgtatcgggtgtggcattgacaatcccc cagggtgctgtaccaaagggtatgcagatcactgtaggtatcatgtgggaagagaaattcttaccaagacttactgccaa acaagcgctcctcagtcctctggtgatatgtcagccttctgtgactttcaagaaacctgtcacactcacactcccccatt gtgctcacaaagtcaaggaggactggagtacaactatacttaaacgtgaaggcagtgaagattctagcaatgactggagt ccaattacagacacagatttttcatggaaagagatcacagatacggaagtttcagtggcattgcatcattttacaggatt tactcttgttggtgaatcggcagaggggagagttgcagccaaggcagtgaatatggtggcatttagcaatccctttcata taggtgctatgtataaaacgaagatatattgtgtaggacattatcattacaaagacaaaattcaggaagtaaagttagag gagaaatctgtaaaccggcgacagtctgagggtgctgtcccattgttggtttaccagaatggagaaaatgtgctggcttc actggacaagtacaagaatgaagaatgggaactggaaggaggacgggaacagttcaaacaggagcttgactacagcctca taatgcatgatctattaccgagttgcagctatgttctgtccccgatcaggagtaccaaaaagatattttgtgaatacagc ttcacccaaaatatttccaagagtgtgacaaagcttaccattgccgatgaggcacaacatgttatacccgttccaatgat accagtacacgatgaccccgtgtcagagatacatagacagatcgttcttatgttagatccaacatcagataccccaacag accacggtgactggagaagtctagcggtcaatgtcggatttacaaatgaagaaatcagatggttggaatcaagacagggc caggaaagtccgacgactattgtattggaaaggttgggcgagttaggaaaaacatatcaaaatcttcacactattctcat cgacatcaaacgacctgatgtggccagtgtcttacagacatttcttcaagaaaatggaaatgacgttatacttcagaaag aggacagagtgagaatgaggcaacactcagtaaatactcccgtgtga |
|
Protein
| Protein ID | pfu_aug1.0_2070.1_44225.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2070.1_44225.t1 MYTKRGNFRKGYVVTALSFLTRYEKARHKVAGIAVLGVILLIVVVVLVFLTCCGWLLLRKQHDKISELEENLDGLRKIFN VKNSTFDNPCKDGFDYINEIDSGEPARPESGDSGQSGGSGHRGFNYTMVVAEKVKTVNTNIPQHVSQLIRTAELAYHGDA VTKRDLMLDRIDIKSPNKGISPISAASKRHTIFQGRPTSYLMSGDNDSSELLQKKGTFVHKMVNEAGDILNVSGVALTIP QGAVPKGMQITVGIMWEEKFLPRLTAKQALLSPLVICQPSVTFKKPVTLTLPHCAHKVKEDWSTTILKREGSEDSSNDWS PITDTDFSWKEITDTEVSVALHHFTGFTLVGESAEGRVAAKAVNMVAFSNPFHIGAMYKTKIYCVGHYHYKDKIQEVKLE EKSVNRRQSEGAVPLLVYQNGENVLASLDKYKNEEWELEGGREQFKQELDYSLIMHDLLPSCSYVLSPIRSTKKIFCEYS FTQNISKSVTKLTIADEAQHVIPVPMIPVHDDPVSEIHRQIVLMLDPTSDTPTDHGDWRSLAVNVGFTNEEIRWLESRQG QESPTTIVLERLGELGKTYQNLHTILIDIKRPDVASVLQTFLQENGNDVILQKEDRVRMRQHSVNTPV |
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