Gene
| Gene Model ID | pfu_aug1.0_20718.1_62028 |
|---|---|
| Locus | scaffold20718.1 : 3007 ... 7685 : - |
| To GenomeBrowser | scaffold20718.1:3007..7685 |
| Genes list of scaffold | scaffold20718.1 |
| Synonym | pfu_aug2.0_3107.1_25638 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20718.1_62028.t1 | 1 | 1 | BTB | 1 | 69 | 1.5e-13 | 50.7 | 7.0e-17 | 1.5e-13 | 50.7 |
| pfu_aug1.0_20718.1_62028.t1 | 2 | 1 | BACK | 48 | 70 | 2.1e-32 | 110.9 | 0.19 | 400.0 | 0.9 |
| pfu_aug1.0_20718.1_62028.t1 | 2 | 2 | BACK | 75 | 176 | 2.1e-32 | 110.9 | 3.7e-35 | 7.8e-32 | 109.1 |
| pfu_aug1.0_20718.1_62028.t1 | 1 | 1 | Kelch_1 | 222 | 257 | 1.1e-08 | 34.4 | 8.7e-12 | 1.8e-08 | 33.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_20718.1_62028.t1 | gi|260832542|ref|XP_002611216.1| | hypothetical protein BRAFLDRAFT_207414 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_20718.1_62028.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20718.1_62028.t1 atgtttacttcagaaatgacggaaagtaaacagaaagaagtcacgattcatgatatcgacgaaacggccatggaaaaact agtgcaatatgcatacacatccaaacttcaactgacaatcgacaatgttcagccgcttctttatgcagcatccatacttc aaatggagatagtagccaaagcatgttgtgaattcatgaagaagcacctacatccaaccaattgtattggagtccataat ttcgcacaacaacataatcgtacagagcttatcaacatggcagacgaatacattctggaaaattttcttgatgttgttga gacggaagaattcaaacatatcccatatgaattgttagataaacttgtaagttcgcaagatttgaacgttaaaaatgaaa tgcaggtgtatgaggctgtgataatgtggatgaagcaagatgtgccaaatcgtagagatcatctcgcaaaacttatcgca aaggtcaaattgccgttacttaatcctgattaccttctgcaaacagtagctacagaagaaatggtccggaaggattttgt gtgtagagattttgtagatgatgccaaggcgtaccaaatgtcacttgccagtcttgtatcagacatcaagatttctgaca gaacaaggccaaggaaaagctatgctggatacctgtatgcagtaggtgggcatgatggaggtaaacatttgaagagtgga gagctgtttgatccaacaagtaacaactggaaggctataaggtctatgtccacacccaggtatgtattggtaaatatttg a |
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Protein
| Protein ID | pfu_aug1.0_20718.1_62028.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20718.1_62028.t1 MFTSEMTESKQKEVTIHDIDETAMEKLVQYAYTSKLQLTIDNVQPLLYAASILQMEIVAKACCEFMKKHLHPTNCIGVHN FAQQHNRTELINMADEYILENFLDVVETEEFKHIPYELLDKLVSSQDLNVKNEMQVYEAVIMWMKQDVPNRRDHLAKLIA KVKLPLLNPDYLLQTVATEEMVRKDFVCRDFVDDAKAYQMSLASLVSDIKISDRTRPRKSYAGYLYAVGGHDGGKHLKSG ELFDPTSNNWKAIRSMSTPRYVLVNI |
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