Gene
| Gene Model ID | pfu_aug1.0_2075.1_66189 |
|---|---|
| Locus | scaffold2075.1 : 13056 ... 17145 : + |
| To GenomeBrowser | scaffold2075.1:13056..17145 |
| Genes list of scaffold | scaffold2075.1 |
| Synonym | pfu_aug2.0_111.1_03647 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2075.1_66189.t1 | 1 | 1 | I-set | 94 | 159 | 8.3e-06 | 25.5 | 6.0e-09 | 1.8e-05 | 24.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2075.1_66189.t1 | gi|341883716|gb|EGT39651.1| | hypothetical protein CAEBREN_02400 [Caenorhabditis brenneri] | 5.0e-38 |
Transcript
| Transcript ID | pfu_aug1.0_2075.1_66189.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2075.1_66189.t1 atgagaagtagtgtccccatcgtattcgatattctgtgctgtacagcgacgtgtggatcaggtatcaccattcgggatgt gttttgcaccagagtgttatcccttggcttaaccatgaacgtgacattgaaagaatgtgacctttctctaaagccagaag caacgaagatgtgcaacaaccggaagtgtccaaaaccgaagatcaaagcgctggacatcaagtttttccagttagacaaa atgaagaaagtaaaattaacgatagggatgaatgcagacatcctcccagacacaactattgttctgaaatgtccaactag aggactaaatccgtatcatatacagtggtataaaaatggcgttcttattgaacccacgataggcaaaagaatcaaagtaa ataataaaatgcatttgaaaataaagcggagtttgccgatcgttgacgatgggatttattcctgcaaagtgggatcatta atggcaagttccaccatttcatatagtaatgtatatgacatattttccgcaactttgatgcggaaacgttttatttccgg ttccggtcccgcaaaattgatacaacgtgacttgggtttaggaagtctcacacaaagagaccccgtgtccagaaggcgac gaccgttgcgtcttgttgaaggaccctggaacccttgctccgctacgtgtgggggaggactccaatctagaaatgttagc tgtgaaattataactcaggactattatgaagtatttccggtacggtactgtacaaaagcaggatacatggaacctactct tattcagagctgtaatactcatccttgtgttgaatggaaaacaagcaattggtcagagtgttctctacagacatgcgtac gcaacatgttctcttaccagagccgtgacgtagactgtgtcatgcaacacagcaatataactctcaatacctcagagtgt gatcagctaggggccatgccaccctcggagaaagaatgcgtcaatgataattgtatggccttatggaatgtgtccaagtg gacagagtgcataggaaaatgtggaaccaagggtttcaaatctcgcatgctgaattgcatatggtcaaagactgggttac ctgcaggaagactgtgtgatcccttaaagcgacccataacaactaaaaactgtcatgtaaaaccatgtagtgaaggtttg cacaattttattgactacgagattgttctaagcattccaaatacacgggagtaa |
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Protein
| Protein ID | pfu_aug1.0_2075.1_66189.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2075.1_66189.t1 MRSSVPIVFDILCCTATCGSGITIRDVFCTRVLSLGLTMNVTLKECDLSLKPEATKMCNNRKCPKPKIKALDIKFFQLDK MKKVKLTIGMNADILPDTTIVLKCPTRGLNPYHIQWYKNGVLIEPTIGKRIKVNNKMHLKIKRSLPIVDDGIYSCKVGSL MASSTISYSNVYDIFSATLMRKRFISGSGPAKLIQRDLGLGSLTQRDPVSRRRRPLRLVEGPWNPCSATCGGGLQSRNVS CEIITQDYYEVFPVRYCTKAGYMEPTLIQSCNTHPCVEWKTSNWSECSLQTCVRNMFSYQSRDVDCVMQHSNITLNTSEC DQLGAMPPSEKECVNDNCMALWNVSKWTECIGKCGTKGFKSRMLNCIWSKTGLPAGRLCDPLKRPITTKNCHVKPCSEGL HNFIDYEIVLSIPNTRE |
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