Gene
| Gene Model ID | pfu_aug1.0_2075.1_66190 |
|---|---|
| Locus | scaffold2075.1 : 21886 ... 29696 : + |
| To GenomeBrowser | scaffold2075.1:21886..29696 |
| Genes list of scaffold | scaffold2075.1 |
| Synonym | pfu_aug2.0_111.1_03649 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2075.1_66190.t1 | 1 | 1 | bZIP_Maf | 263 | 334 | 7.0e-07 | 29.4 | 6.3e-10 | 1.3e-06 | 28.5 |
| pfu_aug1.0_2075.1_66190.t1 | 1 | 1 | bZIP_1 | 268 | 330 | 7.1e-13 | 48.3 | 6.6e-16 | 1.4e-12 | 47.3 |
| pfu_aug1.0_2075.1_66190.t1 | 1 | 1 | bZIP_2 | 274 | 322 | 2.8e-08 | 33.4 | 1.3e-11 | 2.8e-08 | 33.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2075.1_66190.t1 | gi|291227507|ref|XP_002733726.1| | PREDICTED: cyclic AMP-responsive element-binding protein 3-like protein 4-like [Saccoglossus kowalevskii] | 1.4013e-45 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2075.1_66190.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2075.1_66190.t1 atggcggtggaaaatgaccccatagatgttctagaaatgctgtttgataagaatgaaggactgttaaaagaagaagtttc agatctgcctacgattgattttagtgacttgggactttttccagatgatgacattttacagagtgcgctatttgaagcag atattcctacaaacttgacacagacagaacaaaatggacagatatctcctagagatgcttgtatagatcatgattatttt gcacaaaagtctccaagtacaataagtgacagtggaatatctagtgggtcatattcaccaaggagtatgtctgacgagaa gtcccagcaaagccctcaaagtggctatttgtcagaatctccaaggagccaatcaaatctcagtattgagatggacaacc aatcatcatcctatcaagttgacaattcaaatttgaacacatttaatattgacaatttcaatattgatgaattagacatg gaaggtgttgatacttctgcattaatggaagatactgacttcttaaataatttgggtgatgacatcactgatactgatgt ggctataaactttggaactgcagacacagaaagtcattcaagtgtgcaagggacaaaaactatcaaaattatcaaagtgt ctgcaagtggaacagatactctgccatttacaatgaaggatgtttctggaacagattctgcctcacagttcccagagctc aggttgacagatgaagagaaggatctcttgactcgggagggtgttacgttaccaacacacatgcctttaactaaggagga agaaagaattcttaaagctgtccgcagaaaaataagaaataagatttcagccaaagagagtcgcaaaagaaagatgaatt acgtagaaggccttgaaaaacgagtaaaagcctgtactcaggaaaatactcagctcaaaaagaaaatggaaactgtcgag aagcaaaatatttccctattaagccagctgaagaagttacaagctttgatcctatcgaagacgtccaaaccacagacatc tacctgtatcatggtcctcttgttatcgtttgccttcttggtggttccaaactttaatcccttcagcttaaaaacagacg atatgttagatgccaagtctataccaatcccagatcactttaaacgttcactcacccgatttattcaattgaaaagtgta ttcttcggaaaatgttag |
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Protein
| Protein ID | pfu_aug1.0_2075.1_66190.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2075.1_66190.t1 MAVENDPIDVLEMLFDKNEGLLKEEVSDLPTIDFSDLGLFPDDDILQSALFEADIPTNLTQTEQNGQISPRDACIDHDYF AQKSPSTISDSGISSGSYSPRSMSDEKSQQSPQSGYLSESPRSQSNLSIEMDNQSSSYQVDNSNLNTFNIDNFNIDELDM EGVDTSALMEDTDFLNNLGDDITDTDVAINFGTADTESHSSVQGTKTIKIIKVSASGTDTLPFTMKDVSGTDSASQFPEL RLTDEEKDLLTREGVTLPTHMPLTKEEERILKAVRRKIRNKISAKESRKRKMNYVEGLEKRVKACTQENTQLKKKMETVE KQNISLLSQLKKLQALILSKTSKPQTSTCIMVLLLSFAFLVVPNFNPFSLKTDDMLDAKSIPIPDHFKRSLTRFIQLKSV FFGKC |
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