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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2081.1_66192
Locus scaffold2081.1 : 1 ... 9395 : +
To GenomeBrowser scaffold2081.1:1..9395
Genes list of scaffold scaffold2081.1
Synonym pfu_aug2.0_612.1_07725

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2081.1_66192.t1 1 1 Sushi 55 107 1.5e-06 28.4 2.1e-10 1.5e-06 28.4
pfu_aug1.0_2081.1_66192.t1 1 1 MAM 89 196 7.1e-18 64.8 1.2e-21 8.8e-18 64.5

Transcript
Transcript IDpfu_aug1.0_2081.1_66192.t1
Definition-
>pfu_aug1.0_2081.1_66192.t1
attccacgaaatttgcggattactttgaaaatagtaattgtgtacactacggttttgattcagaaggcttcgtacaagta
caacaatcaattcgaaatggatgtccaatgttaacgaaatctatagaactgtcaagcggaggaatagcttgtatagaagc
agattgtccggaacccttatcctacgggaacgtcttggttcttgaagggaaaaactacattgatgctcagagacaatgtg
agtgcaagacaaaatatacaactgtacctgcagatgttattacatgtcagcagtcgctaacgtggacagaggagactatg
tgcgcaactgaaatcaagtgcctcgagttctactatagcatgtatggagaagacataggggttttatcagtgtattacat
agaagaaggtgcatcacagaaaaatgatctttggaatgcaaccggtgatatgggaactgacgaatggtttcaagcaaagt
tctccttagacattcaaactaacttcaagctgatttttgaagcgagtgacggaggctacaatttttatggtgacattgct
gttgactacatagtgctgtccgatacctgttag

Protein
Protein IDpfu_aug1.0_2081.1_66192.t1
Definition-
>pfu_aug1.0_2081.1_66192.t1
STKFADYFENSNCVHYGFDSEGFVQVQQSIRNGCPMLTKSIELSSGGIACIEADCPEPLSYGNVLVLEGKNYIDAQRQCE
CKTKYTTVPADVITCQQSLTWTEETMCATEIKCLEFYYSMYGEDIGVLSVYYIEEGASQKNDLWNATGDMGTDEWFQAKF
SLDIQTNFKLIFEASDGGYNFYGDIAVDYIVLSDTC

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