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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2085.1_51507
Locus scaffold2085.1 : 16206 ... 24906 : +
To GenomeBrowser scaffold2085.1:16206..24906
Genes list of scaffold scaffold2085.1
Synonym pfu_aug2.0_94.1_13577

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2085.1_51507.t1 1 1 PP2C 14 188 0.0 197.7 0.0 0.0 197.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2085.1_51507.t1 gi|241155743|ref|XP_002407635.1| PP2C, putative [Ixodes scapularis] 0.0

Transcript
Transcript IDpfu_aug1.0_2085.1_51507.t1
Definition-
>pfu_aug1.0_2085.1_51507.t1
atgagtaatgggtcaaactctatcagaacctgttacaaccaaagagacatcaagctgtcaaaaccattttgtgaagatga
aaccatgaaagaagaattagctggctctactgctgtcattgttattctacgtgggaataagatttactgtggtaatgtag
gtgattccagagcagtggccagtgttagaggtcaggtagaacaactgtcgtttgaccataaaccagggaacgactcagaa
tctcgacgaatcatagcagcagggggatgggtggaatttaacagagttaatggtaatttagccttgtccagagctcttgg
tgattttgtgttcaaaaagaatgataagaaacctccagaggagcagatagttacagcttatccagatgtcatcgaaaaaa
caatcacaccagaccatgagtttcttattatagcctgtgatgggatttgggacgtattaaccaatcaggaagttgtggat
tttgtaagagtcagaatagctcagaggatggaacctgaaataatctgtgaagagttgatgatgcgatgtttggctccaga
ctgtcagatgggaggactaggatgtgataatatgactgtgattttagtttgctttcttctcggtggatcatacgacgatt
taaccagaaagtgctctcgacaaagttcgtacggacctgctccacatttaacgcgcccaccatatggctttgatctcaag
tag

Protein
Protein IDpfu_aug1.0_2085.1_51507.t1
Definition-
>pfu_aug1.0_2085.1_51507.t1
MSNGSNSIRTCYNQRDIKLSKPFCEDETMKEELAGSTAVIVILRGNKIYCGNVGDSRAVASVRGQVEQLSFDHKPGNDSE
SRRIIAAGGWVEFNRVNGNLALSRALGDFVFKKNDKKPPEEQIVTAYPDVIEKTITPDHEFLIIACDGIWDVLTNQEVVD
FVRVRIAQRMEPEIICEELMMRCLAPDCQMGGLGCDNMTVILVCFLLGGSYDDLTRKCSRQSSYGPAPHLTRPPYGFDLK

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