Gene
| Gene Model ID | pfu_aug1.0_20851.1_25896 |
|---|---|
| Locus | scaffold20851.1 : 8496 ... 19436 : + |
| To GenomeBrowser | scaffold20851.1:8496..19436 |
| Genes list of scaffold | scaffold20851.1 |
| Synonym | pfu_aug2.0_609.1_30978 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20851.1_25896.t1 | 1 | 1 | CR6_interact | 137 | 292 | 4.7e-26 | 91.4 | 4.4e-30 | 6.6e-26 | 90.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_20851.1_25896.t1 | gi|256084770|ref|XP_002578599.1| | 7.0e-16 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 2 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_20851.1_25896.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20851.1_25896.t1 atgattcaagaatatgtacgagtttctactgaactgattcgcttgtggatacttcttcagttcttgtccttccagcatcg cagttttaatgacaaaaaggccccaatgcggacatgaagtagtggtgacgaaacatttcctgaaaatgaaatcacgattt ttgtacggatacatatcaacaaaaacggcgaacgagatgtaaacatggcggcggccatcagactacaaaacggaataatt ttaaagaatatttgtaaagatttttgtggaatccagtaccaggtcgtacgtaataaatctagcttgaaaaaagatcccac ccgagagctcaaagatgtatgtcgattaccttaccatctcagacgtcgaatgaaacatcgaccggagtttgtgccgaata tcaacaaccttgacacaagttttattaccgaaaaacataaaataaaaggttttagaagagggcttttcggtaaatatggc ttcaagtcgggtattgaaccctcagaaatctggccatcggagagggaagttcaagcatatgactcggaagatagacactg gtttgaaccaccattaaaagaaatgatttctacacataaagaggaaatacagatgaaagagaaagctatttcagaaaaaa tgaagagggtagagaagaacatggaattaatgccaggtctgatagaaaagttcagattaaaacaaaagaaagcaagcgat gatagagacatttcaaagaaaaaggtattggaagatgctcaagaagcaagggaacatttcggctttgacatagcaaaaca tgatccaaggtttaaaaaatggatggaagagaaaaaactgaagaaaaaagaagagagaaagcaaaagaagagagatgcac agttcttattaccgaacaagaatttatga |
|
Protein
| Protein ID | pfu_aug1.0_20851.1_25896.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20851.1_25896.t1 MIQEYVRVSTELIRLWILLQFLSFQHRSFNDKKAPMRTXSSGDETFPENEITIFVRIHINKNGERDVNMAAAIRLQNGII LKNICKDFCGIQYQVVRNKSSLKKDPTRELKDVCRLPYHLRRRMKHRPEFVPNINNLDTSFITEKHKIKGFRRGLFGKYG FKSGIEPSEIWPSEREVQAYDSEDRHWFEPPLKEMISTHKEEIQMKEKAISEKMKRVEKNMELMPGLIEKFRLKQKKASD DRDISKKKVLEDAQEAREHFGFDIAKHDPRFKKWMEEKKLKKKEERKQKKRDAQFLLPNKNL |
|