Gene
| Gene Model ID | pfu_aug1.0_20851.1_25897 |
|---|---|
| Locus | scaffold20851.1 : 19507 ... 33819 : - |
| To GenomeBrowser | scaffold20851.1:19507..33819 |
| Genes list of scaffold | scaffold20851.1 |
| Synonym | pfu_aug2.0_609.1_30977 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20851.1_25897.t1 | 1 | 1 | PDZ | 265 | 297 | 4.8e-06 | 26.6 | 1.2e-09 | 9.3e-06 | 25.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_20851.1_25897.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20851.1_25897.t1 atgtatcaaagaatctcagacctcaccataagtgaacaaaacgaaagtgaccaatcaaaatttaatgcaaactatacgaa caattcaagagggccagctccacagagagagctgtttcgacaaagtccctatcagcatagaaattacaatcaaaacgacc cttatagaagacatgattactcaaggacgccagtctcaaatagtgatatgtataattatgattcttcgcgagtgccagta tcaaacagtgcaagtaatccatcaggttcagacaatgcacatgactcttcaagatcctcaggttttagtttcgaaaattc ttgtcgtccatataaccccagtgatcctttacaaactcctgtgaatcagactactcccgacaggtcacgaactccagcct ccgttaacggaggggaagacgatcatagagactcacccagggaatctgggtatagcagtcgagaacatagtagtcataga aactcgccgtgtgatgctacgcagtctcatttctaccatcatgatcatagtgatatacaacatcattctatgaggaacta tgaggacatgtctatgtttgaaactcattctgatccgttgtctcaggtgtctagttctacagatagtgggtacggacatc atgctgataaagtcagcgagtctccagttcaatactcaggttacaactcagtacatcgaccatctgattattatacgcct ttcacaacaccagcaagggaaacaagtacgcccaaatcaagggaggctactcctgtctcagatcatagtcatcagtctac caggcataatgataagggtatatttgtgacaaaggtacaggaggatgggccagcagctgtatccttacggccaggagata aaatcttggaggatgagaacttcaataagcattactttgtaccgctgtctgacagctgcactccttgtcctctagactgt acgctaggattttaa |
|
Protein
| Protein ID | pfu_aug1.0_20851.1_25897.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20851.1_25897.t1 MYQRISDLTISEQNESDQSKFNANYTNNSRGPAPQRELFRQSPYQHRNYNQNDPYRRHDYSRTPVSNSDMYNYDSSRVPV SNSASNPSGSDNAHDSSRSSGFSFENSCRPYNPSDPLQTPVNQTTPDRSRTPASVNGGEDDHRDSPRESGYSSREHSSHR NSPCDATQSHFYHHDHSDIQHHSMRNYEDMSMFETHSDPLSQVSSSTDSGYGHHADKVSESPVQYSGYNSVHRPSDYYTP FTTPARETSTPKSREATPVSDHSHQSTRHNDKGIFVTKVQEDGPAAVSLRPGDKILEDENFNKHYFVPLSDSCTPCPLDC TLGF |
|