Gene
| Gene Model ID | pfu_aug1.0_20945.1_33147 |
|---|---|
| Locus | scaffold20945.1 : 5972 ... 8195 : - |
| To GenomeBrowser | scaffold20945.1:5972..8195 |
| Genes list of scaffold | scaffold20945.1 |
| Synonym | pfu_aug2.0_1305.1_18244 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20945.1_33147.t1 | 2 | 1 | Fasciclin | 32 | 153 | 0.0 | 161.1 | 2.7e-28 | 4.1e-24 | 85.0 |
| pfu_aug1.0_20945.1_33147.t1 | 2 | 2 | Fasciclin | 168 | 287 | 0.0 | 161.1 | 5.5e-25 | 8.2e-21 | 74.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_20945.1_33147.t1 | gi|298674912|ref|YP_003726662.1| | 1.0e-35 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 2 |
Transcript
| Transcript ID | pfu_aug1.0_20945.1_33147.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20945.1_33147.t1 atgttttttgtattatacggtgcgctgtcgcttttactaacgttatcattggcctctgacagcagggacattgttaccta cctacaggaccataacttcaccgtaatcatcgatgatctgaacttagttggtctgacagataaactccgaaatgaaggac cattcaccgtatttgtgcccacggacgaagccttcctagaacttcccacggctttacgagatggtcttcataaagaccta ccaaaactgaaacacatcgtcctgtcacacgtgctgtctgggggttacataggcccagtcatacccacaggatctgctct tactactctgtcaggacaacaacttcacttcagcaaagtacctgacgggtctgtttcagtgaacggtatagagttactag gtgctgatatagtagtaaagaatggagtgatacatagtattgagaaagtcctccttcctcccacagagaccgttatggag tacttggcgtcacacagacaaaggctgtccataatagaatcactcatttatttagcaagaatggatagtacactacaggg ccaaggaccatacaccgtatttcttcccatagacgaagtgttcatgaataacaaaagtcaatttgctcatatatttggtg attccagtaagataagagaaatgatgatgaatcatgcagctaatggtaccctttacaccactgatttgaccgatggacaa tcattacagacgatgggaaccaagtcattcgaggtgtccaagacatacaaaggattaaagatagaagatgcagaagtgat acagcctaatataccagtcactaacggagtcattcacatcacggatagagttcttcaaccaaagtcgtag |
|
Protein
| Protein ID | pfu_aug1.0_20945.1_33147.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20945.1_33147.t1 MFFVLYGALSLLLTLSLASDSRDIVTYLQDHNFTVIIDDLNLVGLTDKLRNEGPFTVFVPTDEAFLELPTALRDGLHKDL PKLKHIVLSHVLSGGYIGPVIPTGSALTTLSGQQLHFSKVPDGSVSVNGIELLGADIVVKNGVIHSIEKVLLPPTETVME YLASHRQRLSIIESLIYLARMDSTLQGQGPYTVFLPIDEVFMNNKSQFAHIFGDSSKIREMMMNHAANGTLYTTDLTDGQ SLQTMGTKSFEVSKTYKGLKIEDAEVIQPNIPVTNGVIHITDRVLQPKS |
|