Gene
| Gene Model ID | pfu_aug1.0_20949.1_47422 |
|---|---|
| Locus | scaffold20949.1 : 12266 ... 16739 : + |
| To GenomeBrowser | scaffold20949.1:12266..16739 |
| Genes list of scaffold | scaffold20949.1 |
| Synonym | pfu_aug2.0_2030.1_01958 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_20949.1_47422.t1 | 2 | 1 | RVT_1 | 154 | 268 | 5.4e-21 | 74.9 | 9.9e-20 | 1.5e-15 | 57.1 |
| pfu_aug1.0_20949.1_47422.t1 | 2 | 2 | RVT_1 | 276 | 355 | 5.4e-21 | 74.9 | 5.8e-08 | 0.00085 | 18.7 |
Transcript
| Transcript ID | pfu_aug1.0_20949.1_47422.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20949.1_47422.t1 atgcgtgacatcatcagtccagacgctgcacagaatccaaagaagttctggtcatttgttaagggaaagaagcaggaatc ttcaggtgttgccccactgcggcatgaagatggaaccctccacagaaattcacagactaaggcgaacatcttaaacacag tcactcagtttaagtcagtcttcacaaaggaagccctgagtgccttgcctgacaaaggggtcagtccttacagttccatg gaacctttcgacatcactgtcaatggcattgggaagctgctccaaaatgtaaagccccacaaagtgactgaacctgattc aattcccgcacgcctcctaaaagaactgtccgatcagctagaacctgcccttacccgcatctatcgtgaatcactaacaa aaggggaactcccggacgattggaagatggctcacattgtgccaatatttaagaaaggcgacaagagcaaggcatctaac tatcgaccggtgtcattaacatccatatgctcaaaactgatggagcgcatactacacagcaacatcattacacacctgga acagcactccatcctgaccgatacccagcacggcttccgtagtaggcgatcatgtgaaactcagttgatctacactgtac atgagctagccaggaatctctccgaggggaaacagattgacgccaaactcttcgatttttctaaggccttcgacaaggtc ccccacgaacggctgctgtataagctacactactacggagtacgagacaacaccctcacatgggtcagaagctttctaca agaggtagttgactcgccagttcgactctttgcggacgactacctcatttaccgaaccatcacaagcaaaggagacaacg acatcctgcaaaaagaccttgcagccttacaacagtgggaggtggactggcaaatgatgttccaccctgagaaatgtacc accatcaacataaccaagaaacactcatcgatccacacagggtaccaactccatggccacacactggagagcgtcccagg aggaaagtacctaggtgtctacatcagcaaggacctctcctggaatagtcatatccagcaaacgtga |
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Protein
| Protein ID | pfu_aug1.0_20949.1_47422.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_20949.1_47422.t1 MRDIISPDAAQNPKKFWSFVKGKKQESSGVAPLRHEDGTLHRNSQTKANILNTVTQFKSVFTKEALSALPDKGVSPYSSM EPFDITVNGIGKLLQNVKPHKVTEPDSIPARLLKELSDQLEPALTRIYRESLTKGELPDDWKMAHIVPIFKKGDKSKASN YRPVSLTSICSKLMERILHSNIITHLEQHSILTDTQHGFRSRRSCETQLIYTVHELARNLSEGKQIDAKLFDFSKAFDKV PHERLLYKLHYYGVRDNTLTWVRSFLQEVVDSPVRLFADDYLIYRTITSKGDNDILQKDLAALQQWEVDWQMMFHPEKCT TINITKKHSSIHTGYQLHGHTLESVPGGKYLGVYISKDLSWNSHIQQT |
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