Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_20957.1_25906
Locus scaffold20957.1 : 7596 ... 16913 : -
To GenomeBrowser scaffold20957.1:7596..16913
Genes list of scaffold scaffold20957.1
Synonym pfu_aug2.0_83.1_10232

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_20957.1_25906.t1 1 1 Cid2 2 42 8.9e-06 25.8 1.3e-09 9.8e-06 25.7

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
maleGonad 1

Transcript
Transcript IDpfu_aug1.0_20957.1_25906.t1
Definition-
>pfu_aug1.0_20957.1_25906.t1
gaacaattgaagaagaagcgtaccattgatgatagagttattaatgttttgaatgataccgtccccttgaaatccttcag
tgcccagaacaaccatgccaaacagtgtgaggaactgtatagtcagttcttcacagttgacagcattttgacactcatca
tatatgataagagttaa

Protein
Protein IDpfu_aug1.0_20957.1_25906.t1
Definition-
>pfu_aug1.0_20957.1_25906.t1
EQLKKKRTIDDRVINVLNDTVPLKSFSAQNNHAKQCEELYSQFFTVDSILTLIIYDKS

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