Gene
| Gene Model ID | pfu_aug1.0_2096.1_37218 |
|---|---|
| Locus | scaffold2096.1 : 36546 ... 43331 : + |
| To GenomeBrowser | scaffold2096.1:36546..43331 |
| Genes list of scaffold | scaffold2096.1 |
| Synonym | pfu_aug2.0_130.1_00288 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2096.1_37218.t1 | 1 | 1 | Ribosomal_L38e | 2 | 69 | 3.7e-34 | 116.2 | 5.4e-38 | 4.0e-34 | 116.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2096.1_37218.t1 | gi|260824537|ref|XP_002607224.1| | hypothetical protein BRAFLDRAFT_286891 [Branchiostoma floridae] | 2.0e-29 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2096.1_37218.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2096.1_37218.t1 atgccaaagcagatccaagaaataaaagatttcctgttgacagccaggaggaaggatgccaaatctgttaaaatcaagaa gaataaggagaatgtgaaattcaaggtgcgatgcagtcggtatctctacacactggtcatcagtgatcgggaaaaggctg acaaactcagacagtccctcccaccaggtttggcagtaaaagaactcaagtaa |
|
Protein
| Protein ID | pfu_aug1.0_2096.1_37218.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2096.1_37218.t1 MPKQIQEIKDFLLTARRKDAKSVKIKKNKENVKFKVRCSRYLYTLVISDREKADKLRQSLPPGLAVKELK |
|