Gene
| Gene Model ID | pfu_aug1.0_2097.1_08222 |
|---|---|
| Locus | scaffold2097.1 : 22420 ... 36535 : - |
| To GenomeBrowser | scaffold2097.1:22420..36535 |
| Genes list of scaffold | scaffold2097.1 |
| Synonym | pfu_aug2.0_552.1_07660 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2097.1_08222.t1 | 1 | 1 | Ependymin | 63 | 192 | 1.1e-20 | 73.7 | 9.5e-25 | 1.4e-20 | 73.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2097.1_08222.t1 | gi|284005061|ref|NP_001164689.1| | ependymin-like protein precursor [Saccoglossus kowalevskii] | 2.0e-35 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2097.1_08222.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2097.1_08222.t1 atgaccatgtacggtgtaactctcctcctctgtctatctgtggcagtgtttgcccaggatcctatgccatgcaatccccc tccacagtgggaagcacgagagatcagggttgataggcaacagaactttgaggagaggagaagattggtttatgatgcag caaatagacgtgagaggcgaattgaagaggtggaagttaacagcacaagaagcttctacgatgaactcatcctgtggaat gagaataaacaatacagagtagatctaaggaccaagaaatgtaatataaccgtaccatacagggaatggaggcctagagg tgtaccaccagagtctaagtttgaatatgaagcggtgattggagcagcgggtatacctggagaatcagtcacaatacaga ttttcacttggaattcaactgacggagattacaaccgtggacttgttacatccccagactgtattcctattcagaacgtc catgcctcacaaaagtatggctttgaggaatcatcatattatgatctgactgctgggatatccgaccccgaggcattcct gattccagaaccatgtaaatcaccacccccaccgctgccaccacatttttaa |
|
Protein
| Protein ID | pfu_aug1.0_2097.1_08222.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2097.1_08222.t1 MTMYGVTLLLCLSVAVFAQDPMPCNPPPQWEAREIRVDRQQNFEERRRLVYDAANRRERRIEEVEVNSTRSFYDELILWN ENKQYRVDLRTKKCNITVPYREWRPRGVPPESKFEYEAVIGAAGIPGESVTIQIFTWNSTDGDYNRGLVTSPDCIPIQNV HASQKYGFEESSYYDLTAGISDPEAFLIPEPCKSPPPPLPPHF |
|