Gene
| Gene Model ID | pfu_aug1.0_21.1_21912 |
|---|---|
| Locus | scaffold21.1 : 10316 ... 14167 : + |
| To GenomeBrowser | scaffold21.1:10316..14167 |
| Genes list of scaffold | scaffold21.1 |
| Synonym | pfu_aug2.0_445.1_17439 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_21.1_21912.t1 | 1 | 1 | SelR | 38 | 158 | 0.0 | 172.3 | 0.0 | 0.0 | 172.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_21.1_21912.t1 | gi|313760640|ref|NP_001186507.1| | methionine-R-sulfoxide reductase B3, mitochondrial [Gallus gallus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_21.1_21912.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21.1_21912.t1 atgaacatcctacatgctgtgacggcagggaggaaggaggcgtcgcccaaactaaagaagctacagaattcctgccagga ggagggggtgtgtcctgtcactatacccaaggaggatctgaaagagaagcttacaccattacagtatcatgtcactcagg aacaaggcactgagagagccttctcaggaaaatatgtgaacaacaaagaggagggtgtgtacacatgtgtagtgtgtggt aacaagttattctcgtctgataacaagtacgactccaagtctggctggccatccttctacgatgtcgtggacaagagtca catacgtatcacagatgatacttcacatgggatgagaagagaggaagtgacatgctcttggtgtggagcccacttaggtc atgtgttcaatgatggtccccaccccacaggccagcgatactgcatgaactctgctgcactcaactttatccctgcccag aacagcaaggggaaacaacccaaagtcaaatctgaactttga |
|
Protein
| Protein ID | pfu_aug1.0_21.1_21912.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21.1_21912.t1 MNILHAVTAGRKEASPKLKKLQNSCQEEGVCPVTIPKEDLKEKLTPLQYHVTQEQGTERAFSGKYVNNKEEGVYTCVVCG NKLFSSDNKYDSKSGWPSFYDVVDKSHIRITDDTSHGMRREEVTCSWCGAHLGHVFNDGPHPTGQRYCMNSAALNFIPAQ NSKGKQPKVKSEL |
|