Gene
| Gene Model ID | pfu_aug1.0_21.1_21914 |
|---|---|
| Locus | scaffold21.1 : 44176 ... 49807 : + |
| To GenomeBrowser | scaffold21.1:44176..49807 |
| Genes list of scaffold | scaffold21.1 |
| Synonym | pfu_aug2.0_445.1_17440 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_21.1_21914.t1 | 1 | 1 | PG_binding_1 | 3 | 49 | 2.7e-08 | 33.6 | 8.1e-11 | 1.3e-07 | 31.4 |
| pfu_aug1.0_21.1_21914.t1 | 1 | 1 | Peptidase_M10 | 79 | 232 | 0.0 | 193.3 | 0.0 | 0.0 | 192.1 |
| pfu_aug1.0_21.1_21914.t1 | 4 | 1 | Hemopexin | 284 | 326 | 0.0 | 173.9 | 5.8e-10 | 9.6e-07 | 28.4 |
| pfu_aug1.0_21.1_21914.t1 | 4 | 2 | Hemopexin | 330 | 372 | 0.0 | 173.9 | 1.1e-13 | 1.8e-10 | 40.3 |
| pfu_aug1.0_21.1_21914.t1 | 4 | 3 | Hemopexin | 375 | 418 | 0.0 | 173.9 | 2.1e-19 | 3.5e-16 | 58.6 |
| pfu_aug1.0_21.1_21914.t1 | 4 | 4 | Hemopexin | 421 | 465 | 0.0 | 173.9 | 2.7e-19 | 4.5e-16 | 58.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_21.1_21914.t1 | gi|242000886|ref|XP_002435086.1| | matrix metalloproteinase, putative [Ixodes scapularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_21.1_21914.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21.1_21914.t1 atgaaatacgggtatatggccgaggaggacaccaaatctggctccctccgatcgtatgaccacatcaaagatgctatacg taacttccaacgttttgcagggctcaagatgacaggaataatggacaggaaaacgagggaaatgatgagtcgcccgcggt gtggagttaaagatgacattggtaatgccaatagggcgcgtaggaggcgacggcgttatgctttacacggcagcaaatgg tccaagaagacaataacttacagagtttccaagtacagcaataagcttgaaaagaaaactacagacaaagaaattcaaag agcttttgatgtttggagtaaggtatcaccattaacattcagaaggatagacaaagggagaccggacattgacattcggt ttgaagtaaaatggcacggcgataacaaccctttcgatgggaggggtcaaacattggcacacgcctattttccacggtac ggaggcgacactcactttgatgacgacgagccatggaccctcaaagttcccagcggtgttaattttttccaagtggccac acatgaattcggtcattcgcttggtttggcccattcagacgtttatagtgcactcatggctcctttctacaaagggtata ccagggattttcgtttgggccgtgacgatattgaagctatacaagccctatatggtacgcccgcacaaagaccgactccc aaaccaactaaacctagcagaattattcctttatttacacctcgtccaaaaacaccaagaataatacctcgccgtaaaac aactgagtctcccgtccaagaaacaccggaagtatgccgcgattccaacattgacgccattacgaaaactcaagatggat ccacttatgttttcaaaggtaaaaactactacagactaggtcgttatggaatagacaagggttaccctagaccaatagaa tgggactggaagggagtcaaaggaccaattgacgctgctcttacatgggataatggatatacttacattttcaagggaga acattattggaaatatctaaacaaacgcaggatctatggtccaaacaagattacagaaggttttgatggtgttcctggta acttggacgccgcagttgtatggggaggcaatggcaaaacttactttttcaaagataatatatattggagatactccggt aggaacgtagattacggctatccaagacctatcagtcgctggaggggactaccaaagggtattaccgctgctttcagatg gaagaatggtagaacttacttctttaccggcaacaagtattacagatacaacgatcaactttttacggtggatgctggtt atccccgttctgttgctacgtggtggttaggttgtcccgaccagggtaaatacatagatataaaggatccaagtagccaa tcgaacactcatatatcagaaaataatccagatgaacagtggataacaatagacggtaacactgtgaaagaagccgtgaa ggcggtcgggaatagtgcatgcaaaaagacatcttcgtctgtattgactagtgcagttttaacggtagcctgtactgtgg gcagattgctcagcaggtga |
|
Protein
| Protein ID | pfu_aug1.0_21.1_21914.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21.1_21914.t1 MKYGYMAEEDTKSGSLRSYDHIKDAIRNFQRFAGLKMTGIMDRKTREMMSRPRCGVKDDIGNANRARRRRRRYALHGSKW SKKTITYRVSKYSNKLEKKTTDKEIQRAFDVWSKVSPLTFRRIDKGRPDIDIRFEVKWHGDNNPFDGRGQTLAHAYFPRY GGDTHFDDDEPWTLKVPSGVNFFQVATHEFGHSLGLAHSDVYSALMAPFYKGYTRDFRLGRDDIEAIQALYGTPAQRPTP KPTKPSRIIPLFTPRPKTPRIIPRRKTTESPVQETPEVCRDSNIDAITKTQDGSTYVFKGKNYYRLGRYGIDKGYPRPIE WDWKGVKGPIDAALTWDNGYTYIFKGEHYWKYLNKRRIYGPNKITEGFDGVPGNLDAAVVWGGNGKTYFFKDNIYWRYSG RNVDYGYPRPISRWRGLPKGITAAFRWKNGRTYFFTGNKYYRYNDQLFTVDAGYPRSVATWWLGCPDQGKYIDIKDPSSQ SNTHISENNPDEQWITIDGNTVKEAVKAVGNSACKKTSSSVLTSAVLTVACTVGRLLSR |
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