Gene
| Gene Model ID | pfu_aug1.0_21.1_21916 |
|---|---|
| Locus | scaffold21.1 : 71261 ... 84075 : - |
| To GenomeBrowser | scaffold21.1:71261..84075 |
| Genes list of scaffold | scaffold21.1 |
| Synonym | pfu_aug2.0_5498.1_29434 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_21.1_21916.t1 | 3 | 1 | Glyco_hydro_31 | 127 | 267 | 0.0 | 178.0 | 1.5e-36 | 1.1e-32 | 113.4 |
| pfu_aug1.0_21.1_21916.t1 | 3 | 2 | Glyco_hydro_31 | 266 | 322 | 0.0 | 178.0 | 7.8e-20 | 5.8e-16 | 58.3 |
| pfu_aug1.0_21.1_21916.t1 | 3 | 3 | Glyco_hydro_31 | 330 | 354 | 0.0 | 178.0 | 0.00032 | 2.4 | 6.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_21.1_21916.t1 | gi|334347418|ref|XP_001368295.2| | PREDICTED: sucrase-isomaltase, intestinal isoform X1 [Monodelphis domestica] | 2.0e-31 |
Transcript
| Transcript ID | pfu_aug1.0_21.1_21916.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21.1_21916.t1 atgtggtatcctacaacgaatcatagagcaccaaaatgtatcttcaaagacaacgttgggtacaagctacagggacctat cagtgtttcggcagatgggcgtatacacaatgcagtattgactaggactggtatgacgtcaatatacggcatgaacctct acgatttaataaacatcactgtagatgcctacaatgaaaaagctttacgaatatatatcagacctcaagcctcagaaagt cactgggaaatcagcgatgatttgttgaaaatgaaccgaccagctccaaaagccgacgtacaatcagaatacaccataga attttaccaagatccaatatttggaattgtcatcaaacgtaattctactggaacaacaatatggggatatggtaacttaa caaacttaaaagccgtgtaccagaggaacaaagatgctggtattcctcaggacgtccagtgggccgacatcgattacatg taccagaagtatatgttcacgtacgacaaaacaacatttgatggactaccagaatttgttgacgaacttcatcaagcagg acaaaaattcattgttattctggatcccgggataggttcggatcctcagataattcctggtgccattcggaatagtccta gttataatgtatacacggacggaatcaacaaaggagtgctggtcaaaaatgctgataatgacaatcctcttgtaggaaag gtatggccaggcttgactgtatttccggattttactcatcctaatgcttcagcattctggacacaatggataagtgccct tcgcaatatattcaaagataagcgacctttcgtcatgactcggtcatcttttgctggtactggacactactcattcaaat ggatgggagacaacaccagcaagtggcctcacatgcactggtctatcataggtattttagagttcggattatttggattt acgatgggatcagaaataaaagaagatgaatccgggaaatattcaaccctctctgcttcacttgacaccatcaatgttca tcttcgtggaggtagcattctgccagtacaagaacctgcaaatactacacagttcagccgtctgaatgctatggggcttc tagttgccatggataaggacactgcttcaggagagctttattttgatgacggtgaaagcatagataaccagactcaccgg tcttcagttagatataatgaagaaccatacgatagaatggaagttttactagtgtcacgatttcatggataccagtgctc aattcaaatgcacctaggaagcatggattctttacttcgtttttga |
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Protein
| Protein ID | pfu_aug1.0_21.1_21916.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21.1_21916.t1 MWYPTTNHRAPKCIFKDNVGYKLQGPISVSADGRIHNAVLTRTGMTSIYGMNLYDLINITVDAYNEKALRIYIRPQASES HWEISDDLLKMNRPAPKADVQSEYTIEFYQDPIFGIVIKRNSTGTTIWGYGNLTNLKAVYQRNKDAGIPQDVQWADIDYM YQKYMFTYDKTTFDGLPEFVDELHQAGQKFIVILDPGIGSDPQIIPGAIRNSPSYNVYTDGINKGVLVKNADNDNPLVGK VWPGLTVFPDFTHPNASAFWTQWISALRNIFKDKRPFVMTRSSFAGTGHYSFKWMGDNTSKWPHMHWSIIGILEFGLFGF TMGSEIKEDESGKYSTLSASLDTINVHLRGGSILPVQEPANTTQFSRLNAMGLLVAMDKDTASGELYFDDGESIDNQTHR SSVRYNEEPYDRMEVLLVSRFHGYQCSIQMHLGSMDSLLRF |
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