Gene
| Gene Model ID | pfu_aug1.0_21093.1_62062 |
|---|---|
| Locus | scaffold21093.1 : 7586 ... 20270 : + |
| To GenomeBrowser | scaffold21093.1:7586..20270 |
| Genes list of scaffold | scaffold21093.1 |
| Synonym | pfu_aug2.0_914.1_14653 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | Pfty2A |
| Description | NCBI Blastp search "BAF42772.1" |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_21093.1_62062.t1 | 2 | 1 | Tyrosinase | 40 | 85 | 6.9e-22 | 78.7 | 0.058 | 850.0 | -0.1 |
| pfu_aug1.0_21093.1_62062.t1 | 2 | 2 | Tyrosinase | 147 | 311 | 6.9e-22 | 78.7 | 1.8e-25 | 2.6e-21 | 76.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_21093.1_62062.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21093.1_62062.t1 atgaacaccggtgtctttgtcagtatacgtgttaataaatataccaagatgaagaaattattggcgcttgctgcgagcct tcccttattgttatgcgtccattgtatcaaagaaaaggaaatactgaaggaatcatataagcaaaaatgtatgaagaatg cggtctatgacttcaattctacaaatcctactaccctggagccaaaatgtgctacactctttgggcacgagtattcggat ataaagaacttcctcaagttcgacgatcaacaaatgaactatattttgtcattggagagagctatgatgcgtacgcaaca caggaacaataaacggcataagcgacaagcaatgatgaggccccggcaggaatgtaggactttgagtgaccctgatagaa acgctctttttggcgccatcgttactttaaaacaaccgtatgaagaagcgttacaggaaattcgtcccggtgtcgcattg tgttattgggattccacgttagattatttgatgccaggggatagtcaaagaaggaccgtggctttctctgatgaactatt tggaaatggacgtggtgcagttataaatagtcaatttgcaaattggcgtctttctgataatacccccttaagacgaatga tcggagagaataattcaagtttgacacgacctggcattgttgaccttattctaacagatccaagaataaatcgtcatcga tggattgtgaatgagggatcgaggtttaatcaaagtcccagatttggtttcatcgaccctgatagcggcatgagacatag ctgggaaagagaacatgataatacacatgtgtgggtaggcggaatcatggttaatgtggagaggtcacctgaagatccag tgttttggttccatcatttatatatcgactacgtttgggaacttttccgaagaaaaattgatccaatggacagattcgat ttgcgtacagattaccccatggattcagttaatgagcagcatagagcttttcaaacaatggcaggctttcctgcttacag aaatatcgacggataccacaatttcttcagaagaatgtatgcacctcatcctagatgcagtaacaactgtggtggctcaa gatttctaaggtgtcctgacattggtccaatgggaaatccagatcgtcgatgtgtatctcttgcaatcgattctgatgtg gtgccagcagcggcggcttcccctgctgcagcaatggctggctttggagcatctcgtgcaggatttgcagcctttggagg accagcagcaatggcttccggtggtgccgctagagtttctctgcaagccacagatgaagttgcgatgcgagcagcaatga gtgcaccacaaacagttgtccaaggtccaaacttcacttcctcgagagctgatagcagacttttattaagctaa |
|
Protein
| Protein ID | pfu_aug1.0_21093.1_62062.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21093.1_62062.t1 MNTGVFVSIRVNKYTKMKKLLALAASLPLLLCVHCIKEKEILKESYKQKCMKNAVYDFNSTNPTTLEPKCATLFGHEYSD IKNFLKFDDQQMNYILSLERAMMRTQHRNNKRHKRQAMMRPRQECRTLSDPDRNALFGAIVTLKQPYEEALQEIRPGVAL CYWDSTLDYLMPGDSQRRTVAFSDELFGNGRGAVINSQFANWRLSDNTPLRRMIGENNSSLTRPGIVDLILTDPRINRHR WIVNEGSRFNQSPRFGFIDPDSGMRHSWEREHDNTHVWVGGIMVNVERSPEDPVFWFHHLYIDYVWELFRRKIDPMDRFD LRTDYPMDSVNEQHRAFQTMAGFPAYRNIDGYHNFFRRMYAPHPRCSNNCGGSRFLRCPDIGPMGNPDRRCVSLAIDSDV VPAAAASPAAAMAGFGASRAGFAAFGGPAAMASGGAARVSLQATDEVAMRAAMSAPQTVVQGPNFTSSRADSRLLLS |
|