Gene
| Gene Model ID | pfu_aug1.0_21116.1_18772 |
|---|---|
| Locus | scaffold21116.1 : 5636 ... 9922 : - |
| To GenomeBrowser | scaffold21116.1:5636..9922 |
| Genes list of scaffold | scaffold21116.1 |
| Synonym | pfu_aug2.0_6360.1_02840 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_21116.1_18772.t1 | 2 | 1 | zf-C2H2 | 6 | 29 | 5.8e-09 | 35.7 | 1.5e-07 | 0.00019 | 21.6 |
| pfu_aug1.0_21116.1_18772.t1 | 2 | 1 | zf-C2H2_4 | 6 | 28 | 5.5e-07 | 29.4 | 0.00012 | 0.14 | 12.5 |
| pfu_aug1.0_21116.1_18772.t1 | 2 | 2 | zf-C2H2 | 35 | 56 | 5.8e-09 | 35.7 | 1.2e-06 | 0.0015 | 18.7 |
| pfu_aug1.0_21116.1_18772.t1 | 2 | 2 | zf-C2H2_4 | 35 | 57 | 5.5e-07 | 29.4 | 1.7e-07 | 0.00021 | 21.3 |
Transcript
| Transcript ID | pfu_aug1.0_21116.1_18772.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21116.1_18772.t1 atggcgcctgctacatttgaatgtgcactttgtggcaaatcatacacacatcgctcagcactactccgtcataatcggac ggtccatggcggagaatccgtcaaatgtgaattttgtggacaaaattttagtcgaaaagacagttatcttcgacatgtaa agtcccatcatgtcagtagacacgacggaaatgaaatccatagcacacagcaaggtggtggtaaacccgagggtgcagcc atttcagaaccccaggtcaatgaccccaccgatgacgaacaaatatgtttttctgaagaagaggcaatcaatggaaatct caacaaaatttccatgaaagcagaagatcaaacgaaatatgatccattgacttttcttaaatcaaaagaagaatccatta gatcactattgaaaaaagccttattgaagcggcgagggatgaaggtgtatattaccatgcagctagtcaaccaggaaaag cggctactgaagctaaccaaaaaaccgggctttaaatcatttaaaatcttcaacgaagacttggcctctatcgaacttca aaaatccaagttagttctaaaccgtcccatctacgtcggtttcagcatcttggacctttctaaagtcttaatgtatgact ttcattacaactacatcaagcggaaatacgggaacactgcacaactgctattcactgacacagattcattatgttatgac atcaaaaccgaagatattcaagaagacatggcgaaagataaacatttgtttgacttcagcgggtataaaaaggaccaccc cctttacgataccaccaataaaaaggtgataggcaaaatgaaagacgagttaaacggtgctttcctaaaggaatttgtag gattaagagccaaaatgtatagcatcctatacgaaagggaacaaactgatgaagaaatcgaaaagttaaaagaaatggaa aaatcccaggatgcaaaagaaatagttctagaggaaaagaaaagaacccaagtggacgaagaaatcgaagagctgaatga aagtggaaaatccctggatgaaaaggaaaaagtcatagaagagaagaaaagagccaaaggggtacttaaagccgtcatcg agtccaaattacgacacgatttgtacactcggtgcctttttaaaaaagaatcgcaaatggagtccatgaatcttttccgc accgacaaacatcaaatacatacggtgaaaataaacaagacgaccctctcagcattcgatgacaaacgatatctattagg agatggaatacatacacttgcatacggtcattggaggacactgaccttatcgtga |
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Protein
| Protein ID | pfu_aug1.0_21116.1_18772.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21116.1_18772.t1 MAPATFECALCGKSYTHRSALLRHNRTVHGGESVKCEFCGQNFSRKDSYLRHVKSHHVSRHDGNEIHSTQQGGGKPEGAA ISEPQVNDPTDDEQICFSEEEAINGNLNKISMKAEDQTKYDPLTFLKSKEESIRSLLKKALLKRRGMKVYITMQLVNQEK RLLKLTKKPGFKSFKIFNEDLASIELQKSKLVLNRPIYVGFSILDLSKVLMYDFHYNYIKRKYGNTAQLLFTDTDSLCYD IKTEDIQEDMAKDKHLFDFSGYKKDHPLYDTTNKKVIGKMKDELNGAFLKEFVGLRAKMYSILYEREQTDEEIEKLKEME KSQDAKEIVLEEKKRTQVDEEIEELNESGKSLDEKEKVIEEKKRAKGVLKAVIESKLRHDLYTRCLFKKESQMESMNLFR TDKHQIHTVKINKTTLSAFDDKRYLLGDGIHTLAYGHWRTLTLS |
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