Gene
| Gene Model ID | pfu_aug1.0_21120.1_62066 |
|---|---|
| Locus | scaffold21120.1 : 1 ... 14692 : + |
| To GenomeBrowser | scaffold21120.1:1..14692 |
| Genes list of scaffold | scaffold21120.1 |
| Synonym | pfu_aug2.0_1190.1_01463 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_21120.1_62066.t1 | 2 | 1 | Nramp | 34 | 86 | 2.4e-23 | 82.5 | 3.6e-11 | 5.3e-07 | 28.7 |
| pfu_aug1.0_21120.1_62066.t1 | 2 | 2 | Nramp | 157 | 228 | 2.4e-23 | 82.5 | 2.2e-18 | 3.3e-14 | 52.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_21120.1_62066.t1 | gi|66766200|dbj|BAD99106.1| | divalent metal transporter [Mizuhopecten yessoensis] | 1.96182e-44 |
Transcript
| Transcript ID | pfu_aug1.0_21120.1_62066.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21120.1_62066.t1 cagtgttcgcccaagttcgttcaacatttccacgtaaaaatcgtatcggtccgtttaatgtcccaaatgcgctggaccaa aatgtccggtttcagaactcgagggaagtagacagaacgaagaaggaggaagtgagcgaagccaacaagtatttcttcat cgaggcagccatagctttattcgtatcgtttatcatcaacctgtttgtcaccgctgtctttgctgagggattttatggga gaaacgcaacagatatcacacgacactgtcattttattttcgatctcgcggacaaaaagcgcatagaaaaacattgggac aaaagaagactcgatgttgatgtgtgcgagaattctcgcatccaagtaaaatcaatgcgattttttaaaaaaagatgcga gaatctcgcaaaatcgcgtcccaaaattatccctgaaaagactacagaggtgcaagttgatatatatagagggggttttc tgaatctcaagtggaagcggtggcagagagtgttactaactcgttctatagccattgttcctaccattctagtcacaata tttagcggcattgaagatctgacccagatgaatgatctcttgaacgttttgatgagtcttcagttaccgttcgcccttat acccattctgtctttcactagttctaaaaaaaattatgggggattttacaaatggagtggtccaatgctaaagttcaaac gactaagttctcggtattatcatgaaaccatgaataatattttatttgtatatcaggttttacataagctctga |
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Protein
| Protein ID | pfu_aug1.0_21120.1_62066.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21120.1_62066.t1 VFAQVRSTFPRKNRIGPFNVPNALDQNVRFQNSREVDRTKKEEVSEANKYFFIEAAIALFVSFIINLFVTAVFAEGFYGR NATDITRHCHFIFDLADKKRIEKHWDKRRLDVDVCENSRIQVKSMRFFKKRCENLAKSRPKIIPEKTTEVQVDIYRGGFL NLKWKRWQRVLLTRSIAIVPTILVTIFSGIEDLTQMNDLLNVLMSLQLPFALIPILSFTSSKKNYGGFYKWSGPMLKFKR LSSRYYHETMNNILFVYQVLHKL |
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