Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2114.1_00974
Locus scaffold2114.1 : 1 ... 8270 : +
To GenomeBrowser scaffold2114.1:1..8270
Genes list of scaffold scaffold2114.1
Synonym pfu_aug2.0_846.1_21206

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2114.1_00974.t1 gi|225707230|gb|ACO09461.1| DNA-directed RNA polymerase I 40 kDa polypeptide [Osmerus mordax] 7.00005e-41

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-Dshape 1
>Adult tissues
maleGonad 1

Transcript
Transcript IDpfu_aug1.0_2114.1_00974.t1
Definition-
>pfu_aug1.0_2114.1_00974.t1
caacagcctcatatagacttctgccagaaattacactactgaagcccgtcaaaggagaattagccaaaatactaaagaaa
tgtttctcaccaggagttattgaagtggatgggaaaggatccaataaaacagcccgagtagccaatgctaggaaggacac
atgtagtagggaggtactccggcatgacgacttaaaagatttggttaaactcagccgcatcagaaaccatttcatcttct
ctgtagagtctacaggtatcttaccccctgatatactggtagaggaggccataaaagtgctgatgtcaaagtgtcggact
ttcatgaacgaattgtcacaagctacctga

Protein
Protein IDpfu_aug1.0_2114.1_00974.t1
Definition-
>pfu_aug1.0_2114.1_00974.t1
TASYRLLPEITLLKPVKGELAKILKKCFSPGVIEVDGKGSNKTARVANARKDTCSREVLRHDDLKDLVKLSRIRNHFIFS
VESTGILPPDILVEEAIKVLMSKCRTFMNELSQAT

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