Gene
| Gene Model ID | pfu_aug1.0_21145.1_25919 |
|---|---|
| Locus | scaffold21145.1 : 1 ... 15875 : - |
| To GenomeBrowser | scaffold21145.1:1..15875 |
| Genes list of scaffold | scaffold21145.1 |
| Synonym | pfu_aug2.0_1427.1_24917 |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | C1q domain containing protein |
| Description | Best hit to MgC1q67. 115 bits, 2e-23 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_21145.1_25919.t1 | 3 | 1 | C1q | 83 | 190 | 0.0 | 199.1 | 4.3e-21 | 3.2e-17 | 62.7 |
| pfu_aug1.0_21145.1_25919.t1 | 3 | 2 | C1q | 217 | 322 | 0.0 | 199.1 | 5.5e-23 | 4.1e-19 | 68.8 |
| pfu_aug1.0_21145.1_25919.t1 | 3 | 3 | C1q | 336 | 427 | 0.0 | 199.1 | 1.4e-21 | 1.1e-17 | 64.2 |
Transcript
| Transcript ID | pfu_aug1.0_21145.1_25919.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21145.1_25919.t1 atgaatttactcgtacttacgttctgcttcacatcaccaatttttgctactaatttccccagcagtgaacaagaattggt gagggacacaatgatgcaggaaatgatgggaagacttaacaatttagaggagagggtacaaaaatgtgagacgggactac aacaagtatctacaagcagaacaggaattaaaaggtatttacttagcggagtacaaaatacaacctctgatgcgacagat gtatcattctacgcccatctatcgaagaatgtagccggtataggagtgcatcacacgatcatattcgatattgtgcgaaa caatcacggtaacgcctataataagtatgacggaatattcaccgccaaaatcccgggaacttacttctttatttggacaa tatctgcacgtgatcgtactggcatggaaacggaacttgtcgtaaatggtgtggtatttggacatgtcatgggagatgca ggtgatcacgatgattgggctgttgcaacaggtttcgtcattgttcgactcgacgttaatgatacagtatggatacgttc tggaccggctagttccggccacttaacggataagagatttttacaagacggtgtgccagaaatagtttcagagtcgactc atgtatcattctacgcccatctgtccaagaatgtcgccggtataggagtgcaccacccaatcgtattcgacaccgtgcgt tacaatgatggaaatgcctataacaaggtcgacggagaattcacggctaaagtaccgggaacttacttctttatttggac aatttctgcacgcgatcgtacgtacatggagacagaacttgtcgtaaatggcattgtattcggacatgttattggagatg cggctcaacacgatgactggggtgtagcaacaggttttgtcattgttcgactgaatgttaatgatacagtctggatacgt tctggacctgtgaataacggccagttgacggccggtataggagtacatcacccaatcgtattcgacaccgtgcggtacaa tgatggaaatgcctacaacaaagtcgacggagaattcacggctaaagtaccggggacttacttctttatttggacaattt ctgcacgcgatcgcacgtacatggaaacggaacttgtcgtaaatggcgttgtattcggacatgttattggggatgcggct gaccacgatgactggggtgtagcaacaggtttcgtcattgttcgactcaatgttaatgacacagtctggattcgttctgg acctgtgaacaatggtcagttgacggcatgcatagaaattgtcgttcagatgaagacttcaacaactgacatcatcaatg atatgaaaattcaaatattagtatatatccaacaagaaaaccttgcattgacgacagtggaatacacccggagagtcaat ggaattcgttaa |
|
Protein
| Protein ID | pfu_aug1.0_21145.1_25919.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21145.1_25919.t1 MNLLVLTFCFTSPIFATNFPSSEQELVRDTMMQEMMGRLNNLEERVQKCETGLQQVSTSRTGIKRYLLSGVQNTTSDATD VSFYAHLSKNVAGIGVHHTIIFDIVRNNHGNAYNKYDGIFTAKIPGTYFFIWTISARDRTGMETELVVNGVVFGHVMGDA GDHDDWAVATGFVIVRLDVNDTVWIRSGPASSGHLTDKRFLQDGVPEIVSESTHVSFYAHLSKNVAGIGVHHPIVFDTVR YNDGNAYNKVDGEFTAKVPGTYFFIWTISARDRTYMETELVVNGIVFGHVIGDAAQHDDWGVATGFVIVRLNVNDTVWIR SGPVNNGQLTAGIGVHHPIVFDTVRYNDGNAYNKVDGEFTAKVPGTYFFIWTISARDRTYMETELVVNGVVFGHVIGDAA DHDDWGVATGFVIVRLNVNDTVWIRSGPVNNGQLTACIEIVVQMKTSTTDIINDMKIQILVYIQQENLALTTVEYTRRVN GIR |
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