Gene
| Gene Model ID | pfu_aug1.0_2120.1_58776 |
|---|---|
| Locus | scaffold2120.1 : 3748 ... 7285 : - |
| To GenomeBrowser | scaffold2120.1:3748..7285 |
| Genes list of scaffold | scaffold2120.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2120.1_58776.t1 | 3 | 1 | I-set | 42 | 131 | 0.0 | 216.6 | 1.0e-24 | 2.5e-21 | 75.3 |
| pfu_aug1.0_2120.1_58776.t1 | 3 | 1 | Ig_3 | 42 | 118 | 1.4e-18 | 67.1 | 1.8e-05 | 0.044 | 14.2 |
| pfu_aug1.0_2120.1_58776.t1 | 3 | 1 | C2-set_2 | 47 | 106 | 3.8e-10 | 39.5 | 7.2e-05 | 0.18 | 11.7 |
| pfu_aug1.0_2120.1_58776.t1 | 3 | 1 | Ig_2 | 50 | 131 | 3.6e-25 | 87.8 | 2.3e-08 | 5.8e-05 | 23.1 |
| pfu_aug1.0_2120.1_58776.t1 | 3 | 1 | V-set | 51 | 118 | 6.6e-09 | 35.6 | 0.00045 | 1.1 | 9.1 |
| pfu_aug1.0_2120.1_58776.t1 | 3 | 1 | ig | 56 | 97 | 2.9e-16 | 59.3 | 1.3e-05 | 0.032 | 14.3 |
| pfu_aug1.0_2120.1_58776.t1 | 3 | 2 | I-set | 146 | 237 | 0.0 | 216.6 | 6.0e-21 | 1.5e-17 | 63.2 |
| pfu_aug1.0_2120.1_58776.t1 | 3 | 2 | Ig_3 | 146 | 224 | 1.4e-18 | 67.1 | 2.6e-12 | 6.4e-09 | 36.1 |
| pfu_aug1.0_2120.1_58776.t1 | 3 | 2 | C2-set_2 | 153 | 189 | 3.8e-10 | 39.5 | 1.2e-06 | 0.0031 | 17.3 |
| pfu_aug1.0_2120.1_58776.t1 | 3 | 2 | V-set | 155 | 224 | 6.6e-09 | 35.6 | 3.1e-06 | 0.0077 | 16.1 |
| pfu_aug1.0_2120.1_58776.t1 | 3 | 2 | Ig_2 | 158 | 230 | 3.6e-25 | 87.8 | 3.6e-13 | 9.0e-10 | 38.5 |
| pfu_aug1.0_2120.1_58776.t1 | 3 | 2 | ig | 161 | 220 | 2.9e-16 | 59.3 | 1.3e-10 | 3.3e-07 | 30.3 |
| pfu_aug1.0_2120.1_58776.t1 | 3 | 3 | I-set | 247 | 336 | 0.0 | 216.6 | 7.6e-25 | 1.9e-21 | 75.7 |
| pfu_aug1.0_2120.1_58776.t1 | 3 | 3 | Ig_3 | 264 | 323 | 1.4e-18 | 67.1 | 0.00015 | 0.37 | 11.3 |
| pfu_aug1.0_2120.1_58776.t1 | 3 | 3 | Ig_2 | 272 | 334 | 3.6e-25 | 87.8 | 3.5e-08 | 8.6e-05 | 22.5 |
| pfu_aug1.0_2120.1_58776.t1 | 3 | 3 | C2-set_2 | 272 | 297 | 3.8e-10 | 39.5 | 0.0031 | 7.6 | 6.5 |
| pfu_aug1.0_2120.1_58776.t1 | 3 | 3 | ig | 273 | 321 | 2.9e-16 | 59.3 | 0.00016 | 0.41 | 10.8 |
| pfu_aug1.0_2120.1_58776.t1 | 3 | 3 | V-set | 304 | 324 | 6.6e-09 | 35.6 | 0.009 | 22.0 | 4.9 |
Transcript
| Transcript ID | pfu_aug1.0_2120.1_58776.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2120.1_58776.t1 atgaatacatcgtgctttgtcgatttcttgctctggaacttccgaagaatttggtttccagactgcgcagaagaaattgt caaagacgaagagagtgccgtagtcaagcccaagggacgtgcaccagaatttgtacttaaaattaaaactgaaacggttg aggagggggagactgccgactttacatgtgaagtggtaggagagcccactcctgtactcaactggctatacaatggtaac aaactggtggaggaggggaaatacatggtgttcgaagaccgtggcctgcatcacctagaaatctacgacatagcaccaac agatgtgggacaatacactgttgaggcagaaaatgtacacggcaagaccacatgtaccgctgatctacaagtcatagcca aagcaccaacagaggaagtcagagagttagaagctcccaagttcttagtagagatccagaccctagaggccagcattcac cagtccaccaaacttacgtgtaaagccagcggtaaacctacaccagaaatactgtggtacaaaaacgacaaagaaatcac caaaactgacaaccgcttcaccatagaatatggagaggaaggtgaatcgtcactactcattgtggatgtactaccagagc atgatgggacatatgttgccacggcaaccaacgaagccggcatcgcaaaaaccaaagctgacttgtttgttgatacaaga gaagagaaaccatatgctccacaattcctcaaagttccagagaaggtcgtcgtcagagagcgtgaccgtgcacaattcct ggtcaaggtcattggtgctccaaaacctacagttcagtggaagagagacaacatggtacttgaggatgctgagttatacc aattagagagttacgaggacacgtactgcttcgagattaaagtcgctgaggtcacagacgagggaccctacacgtgtgtc gctactaacaatgtaggggaggctacttgtgaaatcccactcattgttaatgacacttcaagacccgacatcactacttt tgacgttatttctaattgtgacttcattaatcagattcgacgtcacagttaa |
|
Protein
| Protein ID | pfu_aug1.0_2120.1_58776.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2120.1_58776.t1 MNTSCFVDFLLWNFRRIWFPDCAEEIVKDEESAVVKPKGRAPEFVLKIKTETVEEGETADFTCEVVGEPTPVLNWLYNGN KLVEEGKYMVFEDRGLHHLEIYDIAPTDVGQYTVEAENVHGKTTCTADLQVIAKAPTEEVRELEAPKFLVEIQTLEASIH QSTKLTCKASGKPTPEILWYKNDKEITKTDNRFTIEYGEEGESSLLIVDVLPEHDGTYVATATNEAGIAKTKADLFVDTR EEKPYAPQFLKVPEKVVVRERDRAQFLVKVIGAPKPTVQWKRDNMVLEDAELYQLESYEDTYCFEIKVAEVTDEGPYTCV ATNNVGEATCEIPLIVNDTSRPDITTFDVISNCDFINQIRRHS |
|