Gene
| Gene Model ID | pfu_aug1.0_2120.1_58780 |
|---|---|
| Locus | scaffold2120.1 : 72317 ... 97815 : - |
| To GenomeBrowser | scaffold2120.1:72317..97815 |
| Genes list of scaffold | scaffold2120.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2120.1_58780.t1 | 6 | 1 | I-set | 4 | 93 | 0.0 | 371.6 | 2.5e-25 | 5.4e-22 | 77.4 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 1 | Ig_3 | 4 | 80 | 1.1e-27 | 96.2 | 4.0e-06 | 0.0085 | 16.5 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 1 | Ig_2 | 10 | 93 | 0.0 | 162.1 | 1.4e-08 | 2.9e-05 | 24.0 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 1 | V-set | 11 | 46 | 3.1e-17 | 62.5 | 0.0055 | 12.0 | 5.8 |
| pfu_aug1.0_2120.1_58780.t1 | 3 | 1 | BiPBP_C | 15 | 45 | 1.7e-06 | 27.8 | 0.0097 | 20.0 | 5.1 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 1 | ig | 19 | 73 | 1.7e-23 | 82.5 | 0.0048 | 10.0 | 6.3 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 1 | C2-set_2 | 29 | 44 | 9.4e-15 | 54.2 | 0.0039 | 8.3 | 6.3 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 2 | I-set | 189 | 278 | 0.0 | 371.6 | 1.1e-24 | 2.4e-21 | 75.3 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 2 | Ig_2 | 190 | 274 | 0.0 | 162.1 | 7.9e-12 | 1.7e-08 | 34.4 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 2 | V-set | 196 | 271 | 3.1e-17 | 62.5 | 1.5e-05 | 0.032 | 14.1 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 2 | Ig_3 | 199 | 265 | 1.1e-27 | 96.2 | 4.7e-08 | 9.9e-05 | 22.7 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 2 | C2-set_2 | 200 | 228 | 9.4e-15 | 54.2 | 0.02 | 43.0 | 4.1 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 2 | ig | 205 | 263 | 1.7e-23 | 82.5 | 0.00017 | 0.36 | 10.9 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 3 | I-set | 312 | 357 | 0.0 | 371.6 | 1.6e-09 | 3.3e-06 | 26.8 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 3 | Ig_2 | 312 | 356 | 0.0 | 162.1 | 2.5e-06 | 0.0053 | 16.8 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 3 | Ig_3 | 312 | 359 | 1.1e-27 | 96.2 | 0.0027 | 5.8 | 7.5 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 3 | V-set | 315 | 350 | 3.1e-17 | 62.5 | 0.0065 | 14.0 | 5.6 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 3 | C2-set_2 | 323 | 389 | 9.4e-15 | 54.2 | 0.028 | 60.0 | 3.6 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 3 | ig | 326 | 349 | 1.7e-23 | 82.5 | 0.0019 | 4.0 | 7.6 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 4 | I-set | 405 | 495 | 0.0 | 371.6 | 1.1e-25 | 2.3e-22 | 78.6 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 4 | Ig_3 | 405 | 482 | 1.1e-27 | 96.2 | 7.2e-07 | 0.0015 | 18.9 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 4 | V-set | 408 | 483 | 3.1e-17 | 62.5 | 0.0035 | 7.5 | 6.4 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 4 | Ig_2 | 415 | 494 | 0.0 | 162.1 | 7.5e-11 | 1.6e-07 | 31.3 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 4 | C2-set_2 | 417 | 452 | 9.4e-15 | 54.2 | 0.00049 | 1.0 | 9.2 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 4 | ig | 419 | 477 | 1.7e-23 | 82.5 | 1.1e-06 | 0.0023 | 17.9 |
| pfu_aug1.0_2120.1_58780.t1 | 3 | 2 | BiPBP_C | 421 | 464 | 1.7e-06 | 27.8 | 0.0022 | 4.6 | 7.2 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 5 | I-set | 539 | 629 | 0.0 | 371.6 | 3.4e-22 | 7.3e-19 | 67.4 |
| pfu_aug1.0_2120.1_58780.t1 | 3 | 3 | BiPBP_C | 539 | 586 | 1.7e-06 | 27.8 | 0.00057 | 1.2 | 9.0 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 5 | V-set | 545 | 623 | 3.1e-17 | 62.5 | 0.0013 | 2.7 | 7.8 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 5 | Ig_2 | 547 | 625 | 0.0 | 162.1 | 8.4e-09 | 1.8e-05 | 24.7 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 5 | ig | 553 | 614 | 1.7e-23 | 82.5 | 6.3e-06 | 0.013 | 15.5 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 5 | Ig_3 | 562 | 616 | 1.1e-27 | 96.2 | 0.00016 | 0.34 | 11.4 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 5 | C2-set_2 | 564 | 591 | 9.4e-15 | 54.2 | 0.00028 | 0.59 | 10.0 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 6 | I-set | 638 | 702 | 0.0 | 371.6 | 1.1e-12 | 2.4e-09 | 36.9 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 6 | V-set | 646 | 677 | 3.1e-17 | 62.5 | 6.7e-05 | 0.14 | 12.0 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 6 | Ig_3 | 647 | 686 | 1.1e-27 | 96.2 | 0.00056 | 1.2 | 9.7 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 6 | C2-set_2 | 647 | 693 | 9.4e-15 | 54.2 | 0.00021 | 0.44 | 10.4 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 6 | Ig_2 | 648 | 683 | 0.0 | 162.1 | 8.4e-08 | 0.00018 | 21.5 |
| pfu_aug1.0_2120.1_58780.t1 | 6 | 6 | ig | 652 | 678 | 1.7e-23 | 82.5 | 1.0e-05 | 0.022 | 14.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2120.1_58780.t1 | gi|344252502|gb|EGW08606.1| | Titin [Cricetulus griseus] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_2120.1_58780.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2120.1_58780.t1 atggtgcctccctctttcaccgagaagttacaaccacaatctgtaaaggagggtcaacctgttaaattcaccgtccgtgt tgctgggcaaccagctccggagatcacatggttcaaggatgggtcaaaggtcgtcagctctcctgactttgagatcattc aggagggtgaccttcatactatgtatatacctgaagttttctatgaagattcaggaaaattttctgtgatggccaaaaac ccagccggccaagtggaatgttccgctgagcttagggttgcagctcccatggaggaggtttcagaggaaggtatcaaacc tgtgagtaaagctcgggacgcattcgaaccaaagagaacacctgccgtctttgtaccggaaaaaccatcaatgtcaccta aactccagagaccttcagcattccttaaggaggaacctaaaccccagaggtacaaggaggagataggcatggaggttgca ggaaaagatttaccgttatttgagaagagaattcctctgttccaaacacctgctaaagaggaacccacttctaagagact tgcaccaaaattcacaaagcctttgaaagaccaagtagtcaaggagcaccataaggtggtatttgagtgtgacgtcaaag gtctaccagaaccggtggtcaaatggtaccgggagggtataatcataccaaactcagccgattaccaaatcaaattcgag aatggtaaatgttcactgaccattgccgagattttcccagaggattctgggaaatttaagtgtgtagccactaacgctga aggcagtacagctactgaatcaacactgagagtaataccctcttcaccaatggcctatgaggagaaacctatgtatcgta cagaagtaccaatggatgaggaaaaagttccatcaccaactgaaccggaacagcccgttctggtccagcgaccacataat tgtcagctcgtagagggcggcaatgtcgtgtttgattgtcgtgtgactggagtacctttcccagaaatcatctggaaaaa gaaaggcttccctatacgcaatgatagaagaccatcaggatttgaggaatccttgatgcagaaagactacgtaaagaaag atggacgtataaagttctctagcgagacggagacatcacaatcggagtacgagtcggaggttgatagatcaccgatggca cagcccactccgccacagatcacacagaaacttaaggacttccgtctgatggagggatctgacgctacgtttgtatgcag aattacaggcagacctagacctaaggttgcttggtaccttaatggacatcgtattaagcgttccagcaggtacgagatga agtacaccaaggacggttactgtacgttacgtatcagactggcgctgccggaggatgccggacactacacggtactggcc gtaaacagtgctggcaaagacacatgctccagcaagctatttgttgacaaactaggcaatatcgacgctacgtcttttgt ggcacccgagacactggacaaaatactcaacaagggcagaccagaacaagccaaacctgaggatgagggagggatactgg aggctctgtcacaacccaccttcaagaaagtccctaacaatatggaggtcagagagggtaatacggtcagactggacaca atcgtggctggacgtccggtcccagaactgacctggtatctgaatggccatcctgtacctaatgacactcatcacaagac tgtggtgaatgaggacggagttaactcccttttgattttgggagtgaatcgttatgatgcaggagaatacctctgtgtag ccaagaacaaagccggagagaacaaattcaccgtacatgtcagtgtgctagaaaaagaacaaatgcagccacccaagttt gtagaaagaatacataatctgacagtaaaggaaggtcaaccagtgaccttgacctgcgctgtgtcaggtatccccatgcc gatgatcagctggcaaaaggacggcaaaatgctcgtaccaaacaaaccttacagctatgagatccaagaggaaggatttg tacaacaaataagctacgcctctgactcagaaacaggatacctacgcctggtgtctgaagatgacattgactctagacgc aagttagtaacggaggtgaaaatcttaccaccatctccccctcctccgcctgggccaccaaaaccaacattcaaaactca gaaggttgtacaaaccttcaaaccaggggcaccgaaaccaacaaccgaaaaacaaacggttaccgtagatactcaaaaaa tggtaacacttcaaccaccaagtgtgttacctaaacccaaaaggacacaaccaactttcacaaccagagcggaatttgac tctgcaccagagattgaaataacagagacttcacaaaacaaaaatacacaaataacagaagcgccatggaaaggctctct cagacatatttcaccttcaaaagatagagacttagacatggaatttgagtcaccaataaaccaaggccaatctgataaac actcaaaatacaaacctgagttgaaaccgcatcttgaggaggatgttgacgtaggacagagaacacgaaagacttggatc ccaacaccatttgctgaggctgggttaggtccgctgaattcaagagatgtgaaaggtaaacaattgtctgtattaccaaa ggacattgaccaacagtcagtatctgagaccagcttcgaagttgaaaatatactgaaagaaagcagcataccaaatccat acaaagtggatacagaaacaaagtttgaatttaaaccagttgtgttggaaaacattgagaaaagtaaagatcatcctcta aagagagaacttgatattggggactccaaaatccaggatagcaaacaacaacctgtagataaagaccaagacttgacttc acagaaggctccgaattattggagaccagtgccattcaaggcaccaggagttacattaggggatcctctttcagtcatga cccctaggcaaataccagtgtatttaggggtgcccaaacctttacacgaaattcattatgcttctgatactgaggtaggc acattgcgagtaaaagccgagaaggggataggaatgaaagagcttactatacaagtaccagaaccaaatgcccaacagaa atatgaagatggtaaaccgaaagttgcatcttatcttctaatggaaacggaaccagtacaagaaattcaagacatacgtt acatgtatgacagtgttattggtgatgaaaacttcagtgttgaagctccaaggaaaggaatgtctaagaaaaagtatagg tcaagaaaatcttggaaagccacacctttcgaacaagcaggacttcttctggttaacaaagaaaaggagtctgcttatga agttgatgaagaggaagataaatttgaaacaactttatcaaacaaagtgtctctacagccaaaagaccaggggaaaacac caagcttcacacttctacctgtacaggagaaacattatgtatctgattcagaaatagggatgcttcatcctatgtcaaag aaagatgcaaattattcgcttatacccatacagaaaactcatattgaaaataagaaggaacaacaaacggagttcaagcc tcttgacgactttgaaacctatacatcaatgaagagatttggtaccacaatcttaaaaggtccctcttactacacagtga aaagaggaaatgattttgttagtgacaaacagccatcaggcgagacccttgcagactctgatcgggcagatgttataaaa gtagaccgtggcaaagtcaagaagactcgtaaattatggagacctacacccttcatagaggcaggattggacgcccncaa gagatggagaagagaacccaaagttatacttggtgtggacctgcgtgtcaagaatgaaccttactttggacaaatgcaat taacaactagtgaaaaatctatggagagatcttcaaatgttgatacacagcacattgtgaacacacaacgctataccaag cagatttggagaccagtaaagtttgcagtgccaagatttgtcaaagaagtgaaacatgattctgtggttccatcagagaa ggaagaaagagacttgctagcagcaagtcaacaatatgatgaacttgacatatccacagaagacaaatcagggatttcca cagacagagggtttgttcaagaaatccattatatatcagagacggaaaaaggatttctgcgcatctgtgaagaacccaag ctgcattattcatctgactcagaattcaatgtaagggaaaaacctgggtatgaatcaaggaaatactgggaacctacacc tttcagattggcaggtctcgctgtgaaagaacctgagacaatggtggaagaatcaccagaatacgaaaatgaaaagcaat taagatatgcagacaatgatgttgagggtcaggctaggactgaggaaaatgtcttatggatggatgaagaattgaagaga catgcaaatgttcaagatgatgaggaaaatcagacagatgttaagcttgtagaaggatttgatacttatgcaccattaaa tgaattcggtgccaccatcttcagaggtccatcttactattcagtgaaaaaggaaattgacccagaatttatcacagata agagacctacaagtgataatctagcagattcttatggtacagaaataatcagcacagaaagtgggcaaatcaagaaaacc cgtaaattgtggaagcctacaccatttatagaggcaggtttggaagctgtagaggcgaataaaagttcatataatgatac agatgtaagacctggtcaggaacaatatgaagcagtcaccagtgaccagattagaggaaaggaatcacaagatcagcaaa gaattaccgaaacaattgtaagaggacaaccaccaaggaaacccaaaataattcttggtgttgacttacgaattaagaat gaacctgtattgatacaaacacatccgaaaataagtaaaacacctcttgatacacatcaagtggtagatacacaacacaa taccaaaatgatctggagacctgttagatttggagtgccaagtttagtcagagaagagaaagaggacccttcaagagctt cacatgaggacttgatgcaaaaagagaaagaatcaagtttacaatatgatgaacttgacatagtgacagaagacaatttt gggatttccacagacaaagggtttgtacaagaaatccattatatatcagatactgaaaaaggattgctgcgtgtcaagtc tgtctatgaagaacccaaactgcactattcatctgactctgaattcaatgtaagggaaaaacccgggtatagatcaagga aatactgggaacctacaccttttagattggcaggttttgcagtgaaagatcctgaaactatgaaggaagattcaacagaa taccagactctgaaagctgatgtacatgtaagctctgtagcaaattattctgaggaacaggagatgactgtggagaaact tcaatcgatggatgagcaattgaacatacaggattcgaatattaaagaaaaggaagtaaataaggctgatttcaagcttg tagaaggatttgatacttatgcaccattaaatgaatttggtgccactatcttcagaggtccatcttactattcaatcaaa aaggaaattgatcaagattttataactgatcagagaccaacaagtgaaagtcttacagactctgatggggcggaagtcat taaaacaaaccgtggtaaaacaaagaaaacccgtaaattatggaagcctacaccattcatagaggctggattggagacta tggagacaaagagattacatgatgttaaggatatgaaaagctttcaggaacaaaatgatccaggacatcagcaaatattt actgaaaccactatgagaggaccacctccaaggaaacctaaagttatacttggtgtggacttacgagtcaggaatgagcc ttattttgaacaagtgcaatcaaaagatgatcaaacgacaatggatagattggctactgctgatacagcacacagttttg ttacacagcatcattcaaaaacgttttggaggcctgtatctcactatgagatccgtgaatccgggccggtacaggagata cattacgtgtctgatacagagatgggcacactcaggctcgtgggttactccacagaggatgagccagacagctatgacag aggtcccccacctaaagctcctgagatacccccatcactacagaccaaatacaaaacattcaggaagattgaactccgat cggttgagctccagagagccttcgacagacctaaggcatcagactatgaactaaaacagattgaaagagctcacgagaca agagtgaaaatgaggcatgacaaacaggaaatgaccacagaacagaaatttgtttccacggcaacacagcccagagacac cttggcccagcgggatctgcctgcccgtatggtgcgtcaggatcgcccagaaatccaggttgagatccagaaagcccgga tgattcccgtcataccggaacaagctccgcaggagagtcaggtgtccgagacacagatcacgttagagagacgagaacct ccagtgttcatcaaacctctcagaccatccagggtcaccgagggtaaacctgtcacgtaa |
|
Protein
| Protein ID | pfu_aug1.0_2120.1_58780.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2120.1_58780.t1 MVPPSFTEKLQPQSVKEGQPVKFTVRVAGQPAPEITWFKDGSKVVSSPDFEIIQEGDLHTMYIPEVFYEDSGKFSVMAKN PAGQVECSAELRVAAPMEEVSEEGIKPVSKARDAFEPKRTPAVFVPEKPSMSPKLQRPSAFLKEEPKPQRYKEEIGMEVA GKDLPLFEKRIPLFQTPAKEEPTSKRLAPKFTKPLKDQVVKEHHKVVFECDVKGLPEPVVKWYREGIIIPNSADYQIKFE NGKCSLTIAEIFPEDSGKFKCVATNAEGSTATESTLRVIPSSPMAYEEKPMYRTEVPMDEEKVPSPTEPEQPVLVQRPHN CQLVEGGNVVFDCRVTGVPFPEIIWKKKGFPIRNDRRPSGFEESLMQKDYVKKDGRIKFSSETETSQSEYESEVDRSPMA QPTPPQITQKLKDFRLMEGSDATFVCRITGRPRPKVAWYLNGHRIKRSSRYEMKYTKDGYCTLRIRLALPEDAGHYTVLA VNSAGKDTCSSKLFVDKLGNIDATSFVAPETLDKILNKGRPEQAKPEDEGGILEALSQPTFKKVPNNMEVREGNTVRLDT IVAGRPVPELTWYLNGHPVPNDTHHKTVVNEDGVNSLLILGVNRYDAGEYLCVAKNKAGENKFTVHVSVLEKEQMQPPKF VERIHNLTVKEGQPVTLTCAVSGIPMPMISWQKDGKMLVPNKPYSYEIQEEGFVQQISYASDSETGYLRLVSEDDIDSRR KLVTEVKILPPSPPPPPGPPKPTFKTQKVVQTFKPGAPKPTTEKQTVTVDTQKMVTLQPPSVLPKPKRTQPTFTTRAEFD SAPEIEITETSQNKNTQITEAPWKGSLRHISPSKDRDLDMEFESPINQGQSDKHSKYKPELKPHLEEDVDVGQRTRKTWI PTPFAEAGLGPLNSRDVKGKQLSVLPKDIDQQSVSETSFEVENILKESSIPNPYKVDTETKFEFKPVVLENIEKSKDHPL KRELDIGDSKIQDSKQQPVDKDQDLTSQKAPNYWRPVPFKAPGVTLGDPLSVMTPRQIPVYLGVPKPLHEIHYASDTEVG TLRVKAEKGIGMKELTIQVPEPNAQQKYEDGKPKVASYLLMETEPVQEIQDIRYMYDSVIGDENFSVEAPRKGMSKKKYR SRKSWKATPFEQAGLLLVNKEKESAYEVDEEEDKFETTLSNKVSLQPKDQGKTPSFTLLPVQEKHYVSDSEIGMLHPMSK KDANYSLIPIQKTHIENKKEQQTEFKPLDDFETYTSMKRFGTTILKGPSYYTVKRGNDFVSDKQPSGETLADSDRADVIK VDRGKVKKTRKLWRPTPFIEAGLDAXKRWRREPKVILGVDLRVKNEPYFGQMQLTTSEKSMERSSNVDTQHIVNTQRYTK QIWRPVKFAVPRFVKEVKHDSVVPSEKEERDLLAASQQYDELDISTEDKSGISTDRGFVQEIHYISETEKGFLRICEEPK LHYSSDSEFNVREKPGYESRKYWEPTPFRLAGLAVKEPETMVEESPEYENEKQLRYADNDVEGQARTEENVLWMDEELKR HANVQDDEENQTDVKLVEGFDTYAPLNEFGATIFRGPSYYSVKKEIDPEFITDKRPTSDNLADSYGTEIISTESGQIKKT RKLWKPTPFIEAGLEAVEANKSSYNDTDVRPGQEQYEAVTSDQIRGKESQDQQRITETIVRGQPPRKPKIILGVDLRIKN EPVLIQTHPKISKTPLDTHQVVDTQHNTKMIWRPVRFGVPSLVREEKEDPSRASHEDLMQKEKESSLQYDELDIVTEDNF GISTDKGFVQEIHYISDTEKGLLRVKSVYEEPKLHYSSDSEFNVREKPGYRSRKYWEPTPFRLAGFAVKDPETMKEDSTE YQTLKADVHVSSVANYSEEQEMTVEKLQSMDEQLNIQDSNIKEKEVNKADFKLVEGFDTYAPLNEFGATIFRGPSYYSIK KEIDQDFITDQRPTSESLTDSDGAEVIKTNRGKTKKTRKLWKPTPFIEAGLETMETKRLHDVKDMKSFQEQNDPGHQQIF TETTMRGPPPRKPKVILGVDLRVRNEPYFEQVQSKDDQTTMDRLATADTAHSFVTQHHSKTFWRPVSHYEIRESGPVQEI HYVSDTEMGTLRLVGYSTEDEPDSYDRGPPPKAPEIPPSLQTKYKTFRKIELRSVELQRAFDRPKASDYELKQIERAHET RVKMRHDKQEMTTEQKFVSTATQPRDTLAQRDLPARMVRQDRPEIQVEIQKARMIPVIPEQAPQESQVSETQITLERREP PVFIKPLRPSRVTEGKPVT |
|