Gene
| Gene Model ID | pfu_aug1.0_2122.1_44246 |
|---|---|
| Locus | scaffold2122.1 : 49128 ... 58536 : - |
| To GenomeBrowser | scaffold2122.1:49128..58536 |
| Genes list of scaffold | scaffold2122.1 |
| Synonym | pfu_aug2.0_150.1_00326 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2122.1_44246.t1 | 4 | 1 | zf-met2 | 229 | 266 | 7.8e-10 | 38.5 | 2.1e-06 | 0.0027 | 17.6 |
| pfu_aug1.0_2122.1_44246.t1 | 4 | 1 | zf-Di19 | 229 | 254 | 1.3e-06 | 28.3 | 0.021 | 26.0 | 5.0 |
| pfu_aug1.0_2122.1_44246.t1 | 4 | 1 | zf-C2H2_4 | 230 | 253 | 9.8e-07 | 28.6 | 0.00022 | 0.28 | 11.6 |
| pfu_aug1.0_2122.1_44246.t1 | 4 | 2 | zf-C2H2_4 | 306 | 329 | 9.8e-07 | 28.6 | 0.00062 | 0.76 | 10.2 |
| pfu_aug1.0_2122.1_44246.t1 | 4 | 2 | zf-Di19 | 306 | 335 | 1.3e-06 | 28.3 | 0.0034 | 4.2 | 7.5 |
| pfu_aug1.0_2122.1_44246.t1 | 4 | 2 | zf-met2 | 307 | 335 | 7.8e-10 | 38.5 | 7.8e-05 | 0.097 | 12.6 |
| pfu_aug1.0_2122.1_44246.t1 | 4 | 3 | zf-Di19 | 402 | 432 | 1.3e-06 | 28.3 | 0.0039 | 4.9 | 7.3 |
| pfu_aug1.0_2122.1_44246.t1 | 4 | 3 | zf-met2 | 403 | 431 | 7.8e-10 | 38.5 | 0.00068 | 0.84 | 9.6 |
| pfu_aug1.0_2122.1_44246.t1 | 4 | 3 | zf-C2H2_4 | 403 | 426 | 9.8e-07 | 28.6 | 0.0011 | 1.3 | 9.5 |
| pfu_aug1.0_2122.1_44246.t1 | 4 | 4 | zf-Di19 | 499 | 527 | 1.3e-06 | 28.3 | 0.0029 | 3.6 | 7.7 |
| pfu_aug1.0_2122.1_44246.t1 | 4 | 4 | zf-met2 | 500 | 532 | 7.8e-10 | 38.5 | 0.0012 | 1.5 | 8.8 |
| pfu_aug1.0_2122.1_44246.t1 | 4 | 4 | zf-C2H2_4 | 500 | 520 | 9.8e-07 | 28.6 | 0.0035 | 4.3 | 7.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2122.1_44246.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2122.1_44246.t1 aggactcatttagacccaagggaaggtttggtccctatccagagagagatgtttacgaagctcagcgagtgctggaggta ttggtacagcaaagtaggagtcgtagtattcgtcatattctacagaaagctgagggtgaatcgacattgtctgatctgtc cgatatctccgatacagaccttgatgatgaggatgacgtccaggataaaagttctacagatataggatctgacagcatga gtaaattacgaccagaaccactttatgcagtggattcaatataccaggctggggatttggtaacaagcatgacagatctt cagtccggaaatgagatgagtaaaaaagttggcgaatcatcattggcagatcaagatggttcttgtagtgcatctagatc tgcatcaacactaccagaaagaaaaagaaaaaattctgaaaaatctgagattagagaagcagaaaatgtcccgttgagaa aaatgtctgaaggtacaaagaaaaccgatgcatctaatgacctgaagaggaaaggctcaaaattggactccgatgtatca acaaactccaaggtgaagaaaatgcatattgaagccaatagtgaaggaaacgaacctgtatacttgagtaacagagattc taagagggttagagaacctatccctgctcagtcttatttatcaccaaattaccaatgttcagagtgttatatgaagtttc aatcgaagagatctcttgctttacatctagagtctaagcatggaattgtgaattcaaccagcatatcaggttgccagcca aatacatcatctttacccatcagaacggaacaacgtgcagatgaatccactaattctttggggaaagaggattatcctcc ccaaagagtgagccccacttcaacaagtggctctccattcagttgttccaaatgtaatatgaagttcttatccagcaaat ctctgaacatacatttggaggcaaaacatggacagaaaaaagtaaaggctgtgaattcaaacattttgttaacaatgtgg acagctggtacacacacaagcaaatttgatgttaatgagagtgatggtagttctgttcctaataaatcaaacagtgtgga aaaagttacagataaaccaactaacacggttaacatagagaaatcttcttctcaaagctcaaatgcaagtacgtcgagca gctctcaattcagttgttcaaaatgcggtatgaggttcttatctatcaggtctctaaacatacatttggaagcaaaacat ggccagaagaaagtaaataccgtggattcagacgttatgtcaccaataccgaaaactggtccacttacaagcaaactagt tcaacctgaagttgatgttggttgtgctataaaagaatcaaacggtgatagaaaaatcagaaataaacctgctaatgccg ttaacatagaaaaatctactcctcaaagctcaaacacaagtatgttaagcagccctacgttcaattgcccaaagtgtagt atgaagttcttattcagtaaatctctggacttgcatttggaactaaaacatggccagaagaaagtaaacactgcattttc aaatgattcgccaccagtgaccaacaatgtttggggtagctcagtatctgacaaagcactgattctacatcgacttaact tgcacaagcaattcatcttgttatcatcggctgagatgaacccatacattggaagctgcatgatgactgatctacttttt tccattcgagtaattttgcttttaaaagttaatattgaactaagtataagtactgtgtgtaccaaacttgcataa |
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Protein
| Protein ID | pfu_aug1.0_2122.1_44246.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2122.1_44246.t1 DSFRPKGRFGPYPERDVYEAQRVLEVLVQQSRSRSIRHILQKAEGESTLSDLSDISDTDLDDEDDVQDKSSTDIGSDSMS KLRPEPLYAVDSIYQAGDLVTSMTDLQSGNEMSKKVGESSLADQDGSCSASRSASTLPERKRKNSEKSEIREAENVPLRK MSEGTKKTDASNDLKRKGSKLDSDVSTNSKVKKMHIEANSEGNEPVYLSNRDSKRVREPIPAQSYLSPNYQCSECYMKFQ SKRSLALHLESKHGIVNSTSISGCQPNTSSLPIRTEQRADESTNSLGKEDYPPQRVSPTSTSGSPFSCSKCNMKFLSSKS LNIHLEAKHGQKKVKAVNSNILLTMWTAGTHTSKFDVNESDGSSVPNKSNSVEKVTDKPTNTVNIEKSSSQSSNASTSSS SQFSCSKCGMRFLSIRSLNIHLEAKHGQKKVNTVDSDVMSPIPKTGPLTSKLVQPEVDVGCAIKESNGDRKIRNKPANAV NIEKSTPQSSNTSMLSSPTFNCPKCSMKFLFSKSLDLHLELKHGQKKVNTAFSNDSPPVTNNVWGSSVSDKALILHRLNL HKQFILLSSAEMNPYIGSCMMTDLLFSIRVILLLKVNIELSISTVCTKLA |
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