Gene
| Gene Model ID | pfu_aug1.0_2127.1_44249 |
|---|---|
| Locus | scaffold2127.1 : 5287 ... 30775 : - |
| To GenomeBrowser | scaffold2127.1:5287..30775 |
| Genes list of scaffold | scaffold2127.1 |
| Synonym | pfu_aug2.0_1083.1_11420 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2127.1_44249.t1 | 5 | 1 | TPR_8 | 53 | 67 | 3.3e-11 | 42.1 | 0.82 | 640.0 | 0.5 |
| pfu_aug1.0_2127.1_44249.t1 | 5 | 1 | TPR_12 | 149 | 211 | 1.7e-28 | 98.3 | 6.2e-07 | 0.00049 | 19.9 |
| pfu_aug1.0_2127.1_44249.t1 | 3 | 1 | TPR_11 | 149 | 210 | 7.4e-13 | 47.9 | 1.7e-06 | 0.0013 | 18.3 |
| pfu_aug1.0_2127.1_44249.t1 | 5 | 2 | TPR_12 | 179 | 246 | 1.7e-28 | 98.3 | 1.7e-13 | 1.4e-10 | 40.9 |
| pfu_aug1.0_2127.1_44249.t1 | 4 | 1 | TPR_2 | 181 | 211 | 6.3e-15 | 53.8 | 0.00011 | 0.083 | 12.8 |
| pfu_aug1.0_2127.1_44249.t1 | 4 | 1 | TPR_1 | 181 | 205 | 3.1e-09 | 36.0 | 1.8e-05 | 0.014 | 14.9 |
| pfu_aug1.0_2127.1_44249.t1 | 3 | 1 | Apc3 | 181 | 198 | 5.0e-07 | 29.7 | 0.93 | 730.0 | 0.4 |
| pfu_aug1.0_2127.1_44249.t1 | 3 | 1 | TPR_17 | 181 | 197 | 4.4e-06 | 26.4 | 0.31 | 240.0 | 2.3 |
| pfu_aug1.0_2127.1_44249.t1 | 5 | 2 | TPR_8 | 182 | 203 | 3.3e-11 | 42.1 | 0.0019 | 1.5 | 8.8 |
| pfu_aug1.0_2127.1_44249.t1 | 4 | 1 | TPR_7 | 185 | 213 | 6.1e-17 | 60.0 | 0.00029 | 0.22 | 11.3 |
| pfu_aug1.0_2127.1_44249.t1 | 4 | 1 | TPR_10 | 185 | 210 | 2.5e-08 | 33.5 | 0.042 | 33.0 | 4.6 |
| pfu_aug1.0_2127.1_44249.t1 | 3 | 2 | Apc3 | 220 | 279 | 5.0e-07 | 29.7 | 7.9e-08 | 6.2e-05 | 23.0 |
| pfu_aug1.0_2127.1_44249.t1 | 3 | 2 | TPR_11 | 221 | 286 | 7.4e-13 | 47.9 | 7.5e-10 | 5.8e-07 | 29.0 |
| pfu_aug1.0_2127.1_44249.t1 | 4 | 2 | TPR_2 | 222 | 246 | 6.3e-15 | 53.8 | 4.8e-07 | 0.00037 | 20.1 |
| pfu_aug1.0_2127.1_44249.t1 | 5 | 3 | TPR_8 | 222 | 246 | 3.3e-11 | 42.1 | 1.5e-06 | 0.0012 | 18.5 |
| pfu_aug1.0_2127.1_44249.t1 | 4 | 2 | TPR_10 | 222 | 243 | 2.5e-08 | 33.5 | 0.00014 | 0.11 | 12.4 |
| pfu_aug1.0_2127.1_44249.t1 | 3 | 2 | TPR_17 | 222 | 242 | 4.4e-06 | 26.4 | 0.0016 | 1.3 | 9.4 |
| pfu_aug1.0_2127.1_44249.t1 | 3 | 1 | TPR_14 | 222 | 246 | 4.9e-06 | 26.7 | 0.00017 | 0.13 | 12.9 |
| pfu_aug1.0_2127.1_44249.t1 | 5 | 3 | TPR_12 | 223 | 289 | 1.7e-28 | 98.3 | 1.4e-13 | 1.1e-10 | 41.3 |
| pfu_aug1.0_2127.1_44249.t1 | 4 | 2 | TPR_7 | 223 | 249 | 6.1e-17 | 60.0 | 1.9e-08 | 1.5e-05 | 24.4 |
| pfu_aug1.0_2127.1_44249.t1 | 4 | 2 | TPR_1 | 226 | 244 | 3.1e-09 | 36.0 | 6.8e-05 | 0.053 | 13.1 |
| pfu_aug1.0_2127.1_44249.t1 | 3 | 3 | TPR_17 | 257 | 278 | 4.4e-06 | 26.4 | 0.0009 | 0.7 | 10.2 |
| pfu_aug1.0_2127.1_44249.t1 | 5 | 4 | TPR_12 | 259 | 329 | 1.7e-28 | 98.3 | 1.1e-10 | 9.0e-08 | 31.9 |
| pfu_aug1.0_2127.1_44249.t1 | 4 | 3 | TPR_2 | 260 | 288 | 6.3e-15 | 53.8 | 9.6e-06 | 0.0075 | 16.1 |
| pfu_aug1.0_2127.1_44249.t1 | 5 | 4 | TPR_8 | 260 | 280 | 3.3e-11 | 42.1 | 0.00086 | 0.68 | 9.8 |
| pfu_aug1.0_2127.1_44249.t1 | 3 | 2 | TPR_14 | 260 | 297 | 4.9e-06 | 26.7 | 0.0063 | 4.9 | 8.0 |
| pfu_aug1.0_2127.1_44249.t1 | 4 | 3 | TPR_7 | 261 | 293 | 6.1e-17 | 60.0 | 7.3e-05 | 0.057 | 13.2 |
| pfu_aug1.0_2127.1_44249.t1 | 4 | 3 | TPR_1 | 261 | 279 | 3.1e-09 | 36.0 | 0.0005 | 0.39 | 10.4 |
| pfu_aug1.0_2127.1_44249.t1 | 4 | 3 | TPR_10 | 261 | 289 | 2.5e-08 | 33.5 | 0.00011 | 0.086 | 12.7 |
| pfu_aug1.0_2127.1_44249.t1 | 3 | 3 | Apc3 | 298 | 323 | 5.0e-07 | 29.7 | 0.16 | 120.0 | 2.8 |
| pfu_aug1.0_2127.1_44249.t1 | 5 | 5 | TPR_12 | 305 | 337 | 1.7e-28 | 98.3 | 0.0008 | 0.62 | 10.0 |
| pfu_aug1.0_2127.1_44249.t1 | 4 | 4 | TPR_2 | 305 | 329 | 6.3e-15 | 53.8 | 0.0014 | 1.1 | 9.3 |
| pfu_aug1.0_2127.1_44249.t1 | 3 | 3 | TPR_14 | 305 | 328 | 4.9e-06 | 26.7 | 0.81 | 640.0 | 1.5 |
| pfu_aug1.0_2127.1_44249.t1 | 4 | 4 | TPR_7 | 306 | 334 | 6.1e-17 | 60.0 | 0.0032 | 2.5 | 8.1 |
| pfu_aug1.0_2127.1_44249.t1 | 5 | 5 | TPR_8 | 307 | 329 | 3.3e-11 | 42.1 | 0.081 | 63.0 | 3.6 |
| pfu_aug1.0_2127.1_44249.t1 | 3 | 3 | TPR_11 | 309 | 329 | 7.4e-13 | 47.9 | 0.061 | 48.0 | 3.7 |
| pfu_aug1.0_2127.1_44249.t1 | 4 | 4 | TPR_1 | 310 | 328 | 3.1e-09 | 36.0 | 0.13 | 99.0 | 2.8 |
| pfu_aug1.0_2127.1_44249.t1 | 4 | 4 | TPR_10 | 310 | 333 | 2.5e-08 | 33.5 | 0.075 | 59.0 | 3.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2127.1_44249.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2127.1_44249.t1 atgatgcatctaaggatgcttgctacaatgcaggatttccgtttgtccgactctagcgatgacaaaaagaaaggatacag taagcccgtcagtaccaaaaaggagaaagtcaaagaaaaagaaagaccaaaaacctcgggagaccagaaaacaattcgac agttacttggagaattgtatggagataaagatttcctggaaaaactactgggcgatcctgccctaactggaggacaaaac tctatgaacagagatattaaatgtaaggtagaggatggcttggacttcctagactcacgagctgatttctggcgacagca gaagccgatgtacgcacgcaagagggatcgtgaaaaacagagacagagtgctaagtcccgacagagagaccccactgact accttctgagatgtctagaggaaatagatgaagatcaagttaaggagagatatgatgagagtttaacaaaagccaagaag acacttcgcattgtagagaatatgtcggaggatcagttacagaataaagctgagttgttagccaatatacacagtcagat tggtaacgcctatctagaactcgggaagtatagcctgtcactagaacaccacgaagaggatctcaggatagcaaatagct tctctcttgaagatgccaaatctagagcattagataatctaggaagagtttatgcaaggaaaggaaactttgagaaagct atagaggtgtgggaagaaaaactaccaatgagcaaatcacctttagaaagtacatggctttatcatgaaataggacgatg ctatttagagttaaataagtatcaagatgctcgggactttggagagaaatcgttagctgccgcgcgggatgctgaggatg acggatggcagttacatgcaagtgtgctagtagcccaatctgaagttaaactgaatgaccttcaagcagcatgtgactcg tttgagcgatcgttggagctagctaagagattaggcgatcgagctgccgaagacgctattactaaagctttacaggaagt taataataaaatagttaaaggtgtgaaggaaggagatgatcgggatgacgatgacagaggctcgtacaaggggagagacg atgaaccagaatctgaaggaggaaaagatgattatgatgatgattttgaagatgacaacaaagatagaaaatctgctggt tcaggcaaatctaaaacaccgtcaccaactcaagaacggaaatcaccggaagccaaaggtaaggtagaggaacaagaagc cagctaa |
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Protein
| Protein ID | pfu_aug1.0_2127.1_44249.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2127.1_44249.t1 MMHLRMLATMQDFRLSDSSDDKKKGYSKPVSTKKEKVKEKERPKTSGDQKTIRQLLGELYGDKDFLEKLLGDPALTGGQN SMNRDIKCKVEDGLDFLDSRADFWRQQKPMYARKRDREKQRQSAKSRQRDPTDYLLRCLEEIDEDQVKERYDESLTKAKK TLRIVENMSEDQLQNKAELLANIHSQIGNAYLELGKYSLSLEHHEEDLRIANSFSLEDAKSRALDNLGRVYARKGNFEKA IEVWEEKLPMSKSPLESTWLYHEIGRCYLELNKYQDARDFGEKSLAAARDAEDDGWQLHASVLVAQSEVKLNDLQAACDS FERSLELAKRLGDRAAEDAITKALQEVNNKIVKGVKEGDDRDDDDRGSYKGRDDEPESEGGKDDYDDDFEDDNKDRKSAG SGKSKTPSPTQERKSPEAKGKVEEQEAS |
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