Gene
| Gene Model ID | pfu_aug1.0_2127.1_44250 |
|---|---|
| Locus | scaffold2127.1 : 30942 ... 44785 : - |
| To GenomeBrowser | scaffold2127.1:30942..44785 |
| Genes list of scaffold | scaffold2127.1 |
| Synonym | pfu_aug2.0_7600.1_02919 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2127.1_44250.t1 | 2 | 1 | TPR_11 | 22 | 83 | 7.4e-15 | 54.3 | 2.1e-15 | 1.9e-12 | 46.6 |
| pfu_aug1.0_2127.1_44250.t1 | 3 | 1 | TPR_2 | 23 | 54 | 1.3e-11 | 43.4 | 1.4e-06 | 0.0012 | 18.5 |
| pfu_aug1.0_2127.1_44250.t1 | 2 | 1 | TPR_14 | 23 | 55 | 1.8e-06 | 28.0 | 0.00083 | 0.72 | 10.6 |
| pfu_aug1.0_2127.1_44250.t1 | 2 | 1 | TPR_16 | 27 | 83 | 3.1e-07 | 30.8 | 6.1e-07 | 0.00053 | 20.5 |
| pfu_aug1.0_2127.1_44250.t1 | 3 | 1 | TPR_1 | 34 | 53 | 5.1e-09 | 35.3 | 1.5e-06 | 0.0013 | 18.1 |
| pfu_aug1.0_2127.1_44250.t1 | 3 | 1 | TPR_8 | 35 | 54 | 1.9e-07 | 30.3 | 0.00025 | 0.22 | 11.3 |
| pfu_aug1.0_2127.1_44250.t1 | 3 | 2 | TPR_2 | 58 | 87 | 1.3e-11 | 43.4 | 0.0033 | 2.8 | 8.0 |
| pfu_aug1.0_2127.1_44250.t1 | 3 | 2 | TPR_8 | 61 | 82 | 1.9e-07 | 30.3 | 0.0061 | 5.3 | 7.0 |
| pfu_aug1.0_2127.1_44250.t1 | 3 | 2 | TPR_1 | 64 | 83 | 5.1e-09 | 35.3 | 0.14 | 120.0 | 2.5 |
| pfu_aug1.0_2127.1_44250.t1 | 3 | 3 | TPR_2 | 91 | 121 | 1.3e-11 | 43.4 | 7.7e-05 | 0.067 | 13.1 |
| pfu_aug1.0_2127.1_44250.t1 | 3 | 3 | TPR_8 | 91 | 112 | 1.9e-07 | 30.3 | 0.0037 | 3.2 | 7.7 |
| pfu_aug1.0_2127.1_44250.t1 | 2 | 2 | TPR_14 | 91 | 127 | 1.8e-06 | 28.0 | 5.1e-05 | 0.045 | 14.4 |
| pfu_aug1.0_2127.1_44250.t1 | 3 | 3 | TPR_1 | 92 | 122 | 5.1e-09 | 35.3 | 0.00034 | 0.29 | 10.8 |
| pfu_aug1.0_2127.1_44250.t1 | 2 | 2 | TPR_11 | 93 | 124 | 7.4e-15 | 54.3 | 0.015 | 13.0 | 5.5 |
| pfu_aug1.0_2127.1_44250.t1 | 2 | 2 | TPR_16 | 93 | 128 | 3.1e-07 | 30.8 | 0.0045 | 3.9 | 8.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2127.1_44250.t1 | gi|326665844|ref|XP_003198130.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2127.1_44250.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2127.1_44250.t1 atgccaaggaaaggtcgaggaagcgacacgggctcagaaaaccaggaactagtggggacctttgaaacattacgcgatga aggggaacactttgttcatgtcaagaattatgctaaggctatcgagagttttacgagggccttggacatgaaccccggag ataggaattgcctggtaacaagatctaaatgttggctacagctcggtaatgcagagaattccctgacggacgcagaggaa gcactcgtggaggataaaaactttatcaggggattgcttcaaaaagcagaggccatgtatcagttgggagattttgagac agctcttgtgttttttcatcgaggacataaagagcgaccagagtatcaagaatttcgtttggggattcagaaggctcaag aagctattaacaacagtattggttctccagattctgttaaactatcagctcagggtgatctcacatacttctacaagcaa gaagaggaatacttgatgataatgtccatatatggtaggattgtattggaatttgacagtttggttaacatgacaaccat gtttgatgaatcattacattacatatttgttcctattgttctccttgttaactaccatgtacagtctgatccatttataa tgaaatccctaaatcgtgaaaaacaactgaattaa |
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Protein
| Protein ID | pfu_aug1.0_2127.1_44250.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2127.1_44250.t1 MPRKGRGSDTGSENQELVGTFETLRDEGEHFVHVKNYAKAIESFTRALDMNPGDRNCLVTRSKCWLQLGNAENSLTDAEE ALVEDKNFIRGLLQKAEAMYQLGDFETALVFFHRGHKERPEYQEFRLGIQKAQEAINNSIGSPDSVKLSAQGDLTYFYKQ EEEYLMIMSIYGRIVLEFDSLVNMTTMFDESLHYIFVPIVLLVNYHVQSDPFIMKSLNREKQLN |
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