Gene
| Gene Model ID | pfu_aug1.0_2135.1_51537 |
|---|---|
| Locus | scaffold2135.1 : 11058 ... 12645 : - |
| To GenomeBrowser | scaffold2135.1:11058..12645 |
| Genes list of scaffold | scaffold2135.1 |
| Synonym | pfu_aug2.0_252.1_07230 |
Manual annotation
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2135.1_51537.t1 | gi|260787344|ref|XP_002588713.1| | hypothetical protein BRAFLDRAFT_100231 [Branchiostoma floridae] | 5.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-Dshape | 2 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 2 |
| adductorMuscle | 1 |
| maleGonad | 2 |
| mantle | 1 |
| mantleEdge | 2 |
Transcript
| Transcript ID | pfu_aug1.0_2135.1_51537.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2135.1_51537.t1 atgacagaagtatacgaggaatttaatactttggcacatgtgacaaatttcgaaagccttcaagaaatttttgaggatgg ctacataaaacatcattacgtgaaggattcctccgtgtgtaatcctgacagagtgctgtactctttgaatggtgagaaag caaaagttggactgcatccacttgcgaggtctaaggtagtatggtatggaccttacacaaaggaaagggccaaggaccaa atggaaatggtagaaaggtatggtaacgtcatgtttacccttgatcagctgattggatatgaaggcattctaaggggacc gtccttcaactactatttagtagaagttatacattataagacacagacggctaccaggatcttggtaacaagtaaagaat atccaaatctaaacaagtacgacccttttgtagaaggaggaccttggtactatgatagaaaaaatgacaggcactggtgt ctgaccaaagctattcactttactacaaagacagaagtaaagaacactgttgaattcatgaaggatgaaccctcatctga tttccagatgaagatttggttggcaaaccatgacctttcacacaagatctgtttcagtccaagaaagggtgtacagcttg caagaaattcagatgaatcctttctgcgacttgttcttggtacagttgcatacaaattggagcaacggcattctgtcaaa acagaagacaaaatgccatcttgtatacagttcctagagctgtcagcaaatgcgtattcaagagtacgagatgtgctagg gcactttaggttgagatgcattgcaaatcaagatgcacataacagcgtctcagtagctggcaatcccactaaagagaatg ataaggatgctgtctcagtagatgacgattccatggaagaggatgctcagaacggcagtgattgcatgcaagataatcct gatggtgctgacactctcctggaaaccatgcttaggtcaaagtatggagagataggtgatcagttactgaagatgaagaa cattttgggcgcgcagtcttcattccatcatgtttcttctgccaaagttgcctatatactgttgatattctttaggcaag agttcttcaaagtacaaatacctctggagcagacatttgaagcaatcatgaggttcttggagccaaatggaatctctgca ttcttcaatgttttggaaactatgatagatgattccatgccaagagaagggatagaacaaacttcacataacacccgctt tgtgatgtgccataaagaaattacactgccggatattttttaa |
|
Protein
| Protein ID | pfu_aug1.0_2135.1_51537.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2135.1_51537.t1 MTEVYEEFNTLAHVTNFESLQEIFEDGYIKHHYVKDSSVCNPDRVLYSLNGEKAKVGLHPLARSKVVWYGPYTKERAKDQ MEMVERYGNVMFTLDQLIGYEGILRGPSFNYYLVEVIHYKTQTATRILVTSKEYPNLNKYDPFVEGGPWYYDRKNDRHWC LTKAIHFTTKTEVKNTVEFMKDEPSSDFQMKIWLANHDLSHKICFSPRKGVQLARNSDESFLRLVLGTVAYKLEQRHSVK TEDKMPSCIQFLELSANAYSRVRDVLGHFRLRCIANQDAHNSVSVAGNPTKENDKDAVSVDDDSMEEDAQNGSDCMQDNP DGADTLLETMLRSKYGEIGDQLLKMKNILGAQSSFHHVSSAKVAYILLIFFRQEFFKVQIPLEQTFEAIMRFLEPNGISA FFNVLETMIDDSMPREGIEQTSHNTRFVMCHKEITLPDIF |
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