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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_21388.1_62086
Locus scaffold21388.1 : 1 ... 9838 : -
To GenomeBrowser scaffold21388.1:1..9838
Genes list of scaffold scaffold21388.1
Synonym pfu_aug2.0_1120.1_01393

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_21388.1_62086.t1 1 1 Astacin 37 167 2.5e-28 98.7 5.8e-32 2.9e-28 98.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_21388.1_62086.t1 gi|115758097|ref|XP_781315.2| 2.0e-16

Transcript
Transcript IDpfu_aug1.0_21388.1_62086.t1
Definition-
>pfu_aug1.0_21388.1_62086.t1
tatctatacacttttgccaccagtgtttaagggtctcaatattacttttaaggaactccttatcttgacttgtcagaaag
ccatccactgcaagtatgacgtcattcatcgaattggaagaagagaacaacctacaaaccaagatatcggtttggacgat
gatcaagactgtatagagaaaacaacagttctgcacgaaataatgcacgccattggtatggatcatgaacatcagagaca
ggatagagataattttatagaaatgctttggaacaatatcgtgaatgggcagaacaaccacgacatgaagaaagaacaga
cctttgatagaaatgcctttgatttagaatctatcatgcagtacggactatactcatttgccatcaacagtaatgcaaag
acgatgagagtactggatagcagattggagttcctagtagactccgccaaagcattgacgttttatgacgtcaaggacat
cacagccggttacagctgtactc

Protein
Protein IDpfu_aug1.0_21388.1_62086.t1
Definition-
>pfu_aug1.0_21388.1_62086.t1
IYTLLPPVFKGLNITFKELLILTCQKAIHCKYDVIHRIGRREQPTNQDIGLDDDQDCIEKTTVLHEIMHAIGMDHEHQRQ
DRDNFIEMLWNNIVNGQNNHDMKKEQTFDRNAFDLESIMQYGLYSFAINSNAKTMRVLDSRLEFLVDSAKALTFYDVKDI
TAGYSCT

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