Gene
| Gene Model ID | pfu_aug1.0_21494.1_54761 |
|---|---|
| Locus | scaffold21494.1 : 6226 ... 18779 : + |
| To GenomeBrowser | scaffold21494.1:6226..18779 |
| Genes list of scaffold | scaffold21494.1 |
| Synonym | pfu_aug2.0_1623.1_11774 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_21494.1_54761.t1 | 1 | 1 | RPE65 | 24 | 260 | 1.1e-30 | 106.7 | 8.4e-35 | 1.2e-30 | 106.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_21494.1_54761.t1 | gi|260830146|ref|XP_002610022.1| | hypothetical protein BRAFLDRAFT_99974 [Branchiostoma floridae] | 4.0e-35 |
Transcript
| Transcript ID | pfu_aug1.0_21494.1_54761.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21494.1_54761.t1 atgtccagcaatgatattgcgccttacgctactttaggaccccttgatccaccgtttactcttgaagaaaccctcaaagc tttggaaaatggaatggacaatcctaacgttaatgtgtacaatttcacagaaaatattgttgtgttgtacgacttgtgga tcatgtataacattgacccaagaacacttaatctacaagagaaaatcaacgccgatgttcctaacgcgaaaatgggattt ccctatgccagtccgatatcatgtgcccatcccctacaggagataggcacggaacatcatctgacatttctgggcagctt agcgttgctcccgggtctgaagcataaactgactctcgtcagggtgaaatcttccactgacagggaaatgatcgctcagt gggaggtagagaacatgccctacatgcactccttctccgtaacaaagaaatatgctatttttctcggcagtccctacttc tatgaaatccagaggatgttgaaaaatcttaatatggctgacaccatggtatggtatcctgacaaaccaacaatgatata tctggtagagctctccacaggaaaagtccaaacactacaaacagaatgcatgtttaccatgcaccatataaatgcttttg agatggacgatcagcacattgcggtagatgtatcagacttcggggaagcagtttataccaagttgtctcatcctatatcc aacatgcaacttaattatgtcaacatacaactttactatgtcaacatgcaacttaattatgtcaacatgcgagagattta tgtcaacatgcgacgttataatgttgacatgcaagataattttgtcaacattcaagataaaaatgtttatatacaagata actatgattatgtcctcgtgcgacttatttatgtcaacatgcaagataaatatgttgatatgccatataaatatgttgac atgcaagatgattatgttgacatgcaagatgaatatgttgacatgcaagataattatgtcgcatgttga |
|
Protein
| Protein ID | pfu_aug1.0_21494.1_54761.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21494.1_54761.t1 MSSNDIAPYATLGPLDPPFTLEETLKALENGMDNPNVNVYNFTENIVVLYDLWIMYNIDPRTLNLQEKINADVPNAKMGF PYASPISCAHPLQEIGTEHHLTFLGSLALLPGLKHKLTLVRVKSSTDREMIAQWEVENMPYMHSFSVTKKYAIFLGSPYF YEIQRMLKNLNMADTMVWYPDKPTMIYLVELSTGKVQTLQTECMFTMHHINAFEMDDQHIAVDVSDFGEAVYTKLSHPIS NMQLNYVNIQLYYVNMQLNYVNMREIYVNMRRYNVDMQDNFVNIQDKNVYIQDNYDYVLVRLIYVNMQDKYVDMPYKYVD MQDDYVDMQDEYVDMQDNYVAC |
|