Gene
| Gene Model ID | pfu_aug1.0_215.1_36397 |
|---|---|
| Locus | scaffold215.1 : 63246 ... 70099 : + |
| To GenomeBrowser | scaffold215.1:63246..70099 |
| Genes list of scaffold | scaffold215.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_215.1_36397.t1 | 2 | 1 | gag-asp_proteas | 34 | 59 | 1.3e-06 | 28.0 | 0.54 | 1600.0 | -1.0 |
| pfu_aug1.0_215.1_36397.t1 | 2 | 2 | gag-asp_proteas | 160 | 204 | 1.3e-06 | 28.0 | 3.4e-09 | 1.0e-05 | 25.2 |
| pfu_aug1.0_215.1_36397.t1 | 1 | 1 | BTB_2 | 384 | 477 | 3.3e-14 | 52.8 | 2.4e-17 | 7.2e-14 | 51.7 |
Transcript
| Transcript ID | pfu_aug1.0_215.1_36397.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_215.1_36397.t1 atgatcgatgttttggcgattgatcattttatagatgcttttccacagtctgacctaagaataaaactgaaagaaaaaga tcctaaatctataatggaggccgaaaaacttgccgttacattagaagccttaagtctggctgataaacagcgcgagaaaa atgtacgggtgatcgaagttgccacaagcgaaatttcaaattataatgacccgacgcttggagatcaagttagagaactg atgttggaagtaagagatatgaagcgttggaactactctaggggtcgttaccgacctaacgaccgtcgggtggtcgacct acgatggaaaatggccagaatgtccggccacctaacccggcagctcaacatcagggaaacaggcaacagtcgagtcaggg gccacggctcgaccataaatttgaggcccggatccactcaaaattaccttattcgtgacgacattgagggtttcttcatc aaaactacaataaacaaaatgcaaattgcgatgttgatagacacagggtcaagtgtctcaattattagcgaacattttct gaaaaagttcaaaacctcattgaagcccgaaattacaccagtacgcaaaagattcgtcacagctacagccgacattcaga atgatggaattttcggggtggattttcttgtgcgtcacaattgtgacatactagtaacagaaggatgtatcaaaattgat gatgaacgtgttgcttgtttttatgatgatagcctgatttacaggttgagctgtagggtggttatcaaggaagatataga ggtaccaccagagaccgagagaaatggtttaatggttgcaagagcattggttaaaacatctgaaaatgacaatcttgttt taaggatcgtaaacttcaatagaaaagaagccaaggaccctagcatcgaccttcagatggcaaatggagcagaatctctt cttccaactctggatggcctcgtttcatcagtgcctaccgttgttgcaacagcatccattgaggtgccagaatccgaaat tccagtagagctaaggaagtttgcaactgtagtggaatctgcatctgaaaggttgacgatagaggacagggacaagttga ctaatcttagaaaatgcgcagagagtaagatcattttaaagataggaggaaagtactttcatactagcatgaacacccta aaaggagtacgtgacagtctctttaccaaaatcttccacgaggactcgccatactttcgagtatttaaagacagaccaac gttcttcatagacagagactttaagcattttgacgtaattctaaattttctgagaaatggaggatgtttgccattggagg tgttacccagagatctaagattgctgaatgagatgagggttgaggctgaattttacgagctggcaggattggtgaccacc attgatgccaggcttgctcgattgtttgacgttgcccgtttctga |
|
Protein
| Protein ID | pfu_aug1.0_215.1_36397.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_215.1_36397.t1 MIDVLAIDHFIDAFPQSDLRIKLKEKDPKSIMEAEKLAVTLEALSLADKQREKNVRVIEVATSEISNYNDPTLGDQVREL MLEVRDMKRWNYSRGRYRPNDRRVVDLRWKMARMSGHLTRQLNIRETGNSRVRGHGSTINLRPGSTQNYLIRDDIEGFFI KTTINKMQIAMLIDTGSSVSIISEHFLKKFKTSLKPEITPVRKRFVTATADIQNDGIFGVDFLVRHNCDILVTEGCIKID DERVACFYDDSLIYRLSCRVVIKEDIEVPPETERNGLMVARALVKTSENDNLVLRIVNFNRKEAKDPSIDLQMANGAESL LPTLDGLVSSVPTVVATASIEVPESEIPVELRKFATVVESASERLTIEDRDKLTNLRKCAESKIILKIGGKYFHTSMNTL KGVRDSLFTKIFHEDSPYFRVFKDRPTFFIDRDFKHFDVILNFLRNGGCLPLEVLPRDLRLLNEMRVEAEFYELAGLVTT IDARLARLFDVARF |
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