Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_21554.1_54766
Locus scaffold21554.1 : 2829 ... 9787 : -
To GenomeBrowser scaffold21554.1:2829..9787
Genes list of scaffold scaffold21554.1
Synonym pfu_aug2.0_127.1_23521

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_21554.1_54766.t1 1 1 Sushi 7 70 3.4e-07 30.5 4.1e-11 6.1e-07 29.6

Transcript
Transcript IDpfu_aug1.0_21554.1_54766.t1
Definition-
>pfu_aug1.0_21554.1_54766.t1
actcgaatacttgtagaatgccctcctctcctgtccttgccaaaaaccaacacctctcacactactccggacattagtgt
tagctctcagcagcgctacattggaactgaagtcacagtcacgtgtccagataactacttcatcgtaggtcatgacgtca
ttacttgtctagattctcttgaatggagcgttgatagtcttccacattgtacagacgtcctatatggagttccagaatcc
accaagttgtatataggagtcttctcggcttgtgccctcatagtattactgggatttgctgttgttattggaaaaattat
atgcaagaacagaaaagacgaaagcatttgtaaattcaaacgggaacatgctctgtttatagaccttcccctccttctcc
ttcgcatcttgtttatgaacagtaaatcaaacaatgagttaaacctgaatttctaa

Protein
Protein IDpfu_aug1.0_21554.1_54766.t1
Definition-
>pfu_aug1.0_21554.1_54766.t1
TRILVECPPLLSLPKTNTSHTTPDISVSSQQRYIGTEVTVTCPDNYFIVGHDVITCLDSLEWSVDSLPHCTDVLYGVPES
TKLYIGVFSACALIVLLGFAVVIGKIICKNRKDESICKFKREHALFIDLPLLLLRILFMNSKSNNELNLNF

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