Gene
| Gene Model ID | pfu_aug1.0_2160.1_30013 |
|---|---|
| Locus | scaffold2160.1 : 154209 ... 161995 : - |
| To GenomeBrowser | scaffold2160.1:154209..161995 |
| Genes list of scaffold | scaffold2160.1 |
| Synonym | pfu_aug2.0_933.1_11319 |
Manual annotation
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2160.1_30013.t1 | gi|260831872|ref|XP_002610882.1| | hypothetical protein BRAFLDRAFT_126269 [Branchiostoma floridae] | 5.0e-16 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2160.1_30013.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2160.1_30013.t1 atgtctgtactagtgaaccgctcaacatctgcatttctacgcctgagtcatgccaataagtatcctaatgacttcctatt caagcagaatactgacacagtgttaaggccaacatcaggccttgtaacaaaggatgccgtgatgaagatcgacaataaac tccccgatgtcctgcttaacttcgatcgagatgaaggatgcgttccccctgagagtttctctgttccagacgtacagaac tcccttttgcattcagactcaaacttgaggccagtttcgaggcgcgacaacgcggcaaaacccgatggtactaataatgc ggaaacgccaacggagagtgaggagacagataacggcagtcatagtggattgtcgctgttcatttcaacggagaaaaatt caaacaagcaaagtaaaaagaggaagagagcaaagtcgggtagggcatcaaagaatcgtcatggaaactcttcgaaagga aaaaggcaaaattcttccaatacaaaatcagggactacttctacaaaagtgaatacaaatctaggaacaagtacagttaa agtcaaagatatagtgaatggagtggcaggattaggtattcttgactcgtcgatatgtaaacctgttatattacataaac cctccatccaggagcggaaaaataatacgatgtcagaaaatatacgaaggagggaaaatctagatgtaaatagatctgtg aattctaagtcagctaacgccaaaaatgtttcaaacggtttaacgactaaatctgtcacgctacctcagatgtccaataa tttcatggtaaagtcggatccggttttgagattatctgtgggatcggaacctctcaatagttcaaggacgtatgttcaac agattcataaaatgcacaacaatcattccgaggaaatcactcgcatcactaaaatcttcctgtctgataagcattctggg gtggtaaaggattgtgggatggaaatacctatggcgccacctgctacacccacaccagagcaattgaggaaagtggaata tgttcctagcatgaatgatataagatctcagcgtgctgtgaaggtaaagcttcaggtccttgagagagaagcacagaaaa agtcagccagacggagagaggaagtggcaaggatggaaaaacagaacatgaaagaacgggaaaaggaaatcaggctacaa caaagacaggaggtaatgtggggacaaaatgtattatgctacatttga |
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Protein
| Protein ID | pfu_aug1.0_2160.1_30013.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2160.1_30013.t1 MSVLVNRSTSAFLRLSHANKYPNDFLFKQNTDTVLRPTSGLVTKDAVMKIDNKLPDVLLNFDRDEGCVPPESFSVPDVQN SLLHSDSNLRPVSRRDNAAKPDGTNNAETPTESEETDNGSHSGLSLFISTEKNSNKQSKKRKRAKSGRASKNRHGNSSKG KRQNSSNTKSGTTSTKVNTNLGTSTVKVKDIVNGVAGLGILDSSICKPVILHKPSIQERKNNTMSENIRRRENLDVNRSV NSKSANAKNVSNGLTTKSVTLPQMSNNFMVKSDPVLRLSVGSEPLNSSRTYVQQIHKMHNNHSEEITRITKIFLSDKHSG VVKDCGMEIPMAPPATPTPEQLRKVEYVPSMNDIRSQRAVKVKLQVLEREAQKKSARRREEVARMEKQNMKEREKEIRLQ QRQEVMWGQNVLCYI |
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