Gene
| Gene Model ID | pfu_aug1.0_21712.1_25961 |
|---|---|
| Locus | scaffold21712.1 : 1 ... 3297 : + |
| To GenomeBrowser | scaffold21712.1:1..3297 |
| Genes list of scaffold | scaffold21712.1 |
| Synonym | pfu_aug2.0_3458.1_29106 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_21712.1_25961.t1 | 4 | 1 | NHL | 151 | 170 | 1.3e-07 | 31.2 | 0.00011 | 0.4 | 10.7 |
| pfu_aug1.0_21712.1_25961.t1 | 4 | 2 | NHL | 242 | 263 | 1.3e-07 | 31.2 | 0.023 | 87.0 | 3.3 |
| pfu_aug1.0_21712.1_25961.t1 | 4 | 3 | NHL | 291 | 306 | 1.3e-07 | 31.2 | 0.00061 | 2.3 | 8.3 |
| pfu_aug1.0_21712.1_25961.t1 | 4 | 4 | NHL | 332 | 347 | 1.3e-07 | 31.2 | 0.0016 | 5.8 | 7.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_21712.1_25961.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21712.1_25961.t1 tggtgtgaggagagaagaaaacgtttctgaatcgaatgaaaacagtaacaatattgacagtccgcccgaggtaaaacctt taccacagaaaaatgtgaatagatctttgttacgaggtaagacagaaattgatagacggaagtttgatgacagtaagacg atgagaaaatttgacagatccaatacaatggttgcaggtggttcaaagccaaactcaaagaaaacattaaacaagactgt ttcttctccgtttttgaaagtacacatgtccgaactgaaaatgattttgcggaaagaatttctttgcagacgacacaaag gatgtgtgaattctataacaccagtgacgactgaaaaagcatggatggttatccaaaattctgctgttgctctctacaac agaaatggaaatttactgcaaagcataacaaaacacagacgaactgtaacggatgcttgtattgatgaaaatggcaatat atatctggcatgttttaatgacaaatgcatcatgcgaatctcaaagactggaggtttatccaagtttactggcacttacg gaatttttcctgcagaactagcattgacgacgcaaagagagttggtggtcgtaggtgttggtaggaaagatgcagtgacg tatgatgaagataaagaatatggcgtgctgatatttgggtctgatggtcaactcatcacaaaaattacagcattatctga accttttcgataccccatttacgtcgacgttagcgtccatggtgaaatagcagtgggggattatatcaacaaagaagtgg tccttcttacaatctcaggatctgagttacttcgtttcaatggttctgaaatatttgctcattcttttgttccaaagggc ctctgctttgacagattaggaaatgttattgttgccaactgggatggagcactatgcattcttgaaagagacaaacagtt tgcacctcgtggacttctactttcagatggttttgagcctttgagtattgctgtcgacgagaaaaacgatttgtggattg gtggtagaaatggtgctgttgtccgcgtgtatagctttgaataa |
|
Protein
| Protein ID | pfu_aug1.0_21712.1_25961.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21712.1_25961.t1 GVRREENVSESNENSNNIDSPPEVKPLPQKNVNRSLLRGKTEIDRRKFDDSKTMRKFDRSNTMVAGGSKPNSKKTLNKTV SSPFLKVHMSELKMILRKEFLCRRHKGCVNSITPVTTEKAWMVIQNSAVALYNRNGNLLQSITKHRRTVTDACIDENGNI YLACFNDKCIMRISKTGGLSKFTGTYGIFPAELALTTQRELVVVGVGRKDAVTYDEDKEYGVLIFGSDGQLITKITALSE PFRYPIYVDVSVHGEIAVGDYINKEVVLLTISGSELLRFNGSEIFAHSFVPKGLCFDRLGNVIVANWDGALCILERDKQF APRGLLLSDGFEPLSIAVDEKNDLWIGGRNGAVVRVYSFE |
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