Gene
| Gene Model ID | pfu_aug1.0_2172.1_58808 |
|---|---|
| Locus | scaffold2172.1 : 7096 ... 50778 : + |
| To GenomeBrowser | scaffold2172.1:7096..50778 |
| Genes list of scaffold | scaffold2172.1 |
| Synonym | pfu_aug2.0_1418.1_28277 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2172.1_58808.t1 | 1 | 1 | CMAS | 13 | 197 | 3.5e-06 | 26.2 | 6.9e-09 | 5.1e-06 | 25.7 |
| pfu_aug1.0_2172.1_58808.t1 | 1 | 1 | Methyltransf_23 | 14 | 95 | 6.0e-08 | 32.5 | 1.7e-10 | 1.2e-07 | 31.5 |
| pfu_aug1.0_2172.1_58808.t1 | 1 | 1 | Methyltransf_9 | 19 | 130 | 8.3e-06 | 24.7 | 1.8e-08 | 1.3e-05 | 24.0 |
| pfu_aug1.0_2172.1_58808.t1 | 1 | 1 | PrmA | 23 | 103 | 2.1e-10 | 40.2 | 4.9e-13 | 3.6e-10 | 39.4 |
| pfu_aug1.0_2172.1_58808.t1 | 1 | 1 | Methyltransf_18 | 24 | 128 | 1.8e-13 | 51.0 | 4.3e-16 | 3.2e-13 | 50.2 |
| pfu_aug1.0_2172.1_58808.t1 | 1 | 1 | Methyltransf_31 | 24 | 142 | 6.4e-13 | 48.5 | 1.5e-15 | 1.1e-12 | 47.8 |
| pfu_aug1.0_2172.1_58808.t1 | 1 | 1 | Methyltransf_26 | 24 | 98 | 9.8e-08 | 32.0 | 2.3e-10 | 1.7e-07 | 31.2 |
| pfu_aug1.0_2172.1_58808.t1 | 1 | 1 | MTS | 24 | 83 | 7.9e-06 | 25.3 | 1.7e-08 | 1.3e-05 | 24.6 |
| pfu_aug1.0_2172.1_58808.t1 | 1 | 1 | PRMT5 | 26 | 252 | 7.4e-06 | 25.1 | 1.2e-08 | 9.2e-06 | 24.8 |
| pfu_aug1.0_2172.1_58808.t1 | 1 | 1 | Methyltransf_25 | 27 | 103 | 1.7e-06 | 28.3 | 4.8e-09 | 3.5e-06 | 27.2 |
| pfu_aug1.0_2172.1_58808.t1 | 1 | 1 | Methyltransf_12 | 28 | 128 | 9.0e-06 | 26.0 | 2.0e-08 | 1.5e-05 | 25.3 |
| pfu_aug1.0_2172.1_58808.t1 | 1 | 1 | Methyltransf_11 | 29 | 128 | 2.1e-09 | 37.7 | 6.1e-12 | 4.5e-09 | 36.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2172.1_58808.t1 | gi|241814081|ref|XP_002416539.1| | protein arginine N-methyltransferase PRMT1, putative [Ixodes scapularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_2172.1_58808.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2172.1_58808.t1 atgttacaagacgagaaaaggacaagcacctacagaaacgccatattaggaaacaagcacctgttcaggggcaaagtcgt catggatgttgggtgtggtacggggattctgtcaatgtttgctgctcaggctggagcagctaaagttatagggattgata attccgctatcatagagagagctcgcaaaattatcaaagacaacaacttcgaagaagacattacgttgatacgaggaaaa gtagaggaagtgtctctccccgagggcatagagaatgtagacattatcgtcagtgaatggatgggacaagctctgtttta cgagtctgtattaagtacgattatctatgccagggacaaatggctgaaacctggaggtttgatattccctgaccgtgtgg ctctgtatcttgctggaatagaaggggaagaagaattagaattaagcatgaattgacacgtgcaaattttccgagaatcg cttcgcgattcacggaatttgcacgtgtcctaccagaattatacatccatgaacaccaaaagttggagagatgtttatgg attcaagatggagacgttgcggaaatggagtatgtttgaagctgccttagaagcggtgaatccgtcaagagtagtaacaa attcctgcctagtgaagagtcgtaacgacagtttcattcatggtcttgttctgtattttgaggttgagtttacctcttgc gtgatgcgaacggggttttctacttctccacacgctttccctacacattggtaccaatcgacactctattttgatgacaa aaagttgaacgcaaagaaaggagaagaaatctttggcagcattactataaagcccagtaatcgtcacaagcatcttgcag gcgaagaaattcaaaatgataagtcaatgctggaattgtccaacatgtcgaaaagagagcaggatatttcctgtataaat tctagaagatttgaacaagtttctaaattgaaatccttaacctag |
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Protein
| Protein ID | pfu_aug1.0_2172.1_58808.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2172.1_58808.t1 MLQDEKRTSTYRNAILGNKHLFRGKVVMDVGCGTGILSMFAAQAGAAKVIGIDNSAIIERARKIIKDNNFEEDITLIRGK VEEVSLPEGIENVDIIVSEWMGQALFYESVLSTIIYARDKWLKPGGLIFPDRVALYLAGIEGEEELELSMNXHVQIFRES LRDSRNLHVSYQNYTSMNTKSWRDVYGFKMETLRKWSMFEAALEAVNPSRVVTNSCLVKSRNDSFIHGLVLYFEVEFTSC VMRTGFSTSPHAFPTHWYQSTLYFDDKKLNAKKGEEIFGSITIKPSNRHKHLAGEEIQNDKSMLELSNMSKREQDISCIN SRRFEQVSKLKSLT |
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