Gene
| Gene Model ID | pfu_aug1.0_21769.1_11410 |
|---|---|
| Locus | scaffold21769.1 : 1 ... 11492 : + |
| To GenomeBrowser | scaffold21769.1:1..11492 |
| Genes list of scaffold | scaffold21769.1 |
| Synonym | pfu_aug2.0_8110.1_02952 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_21769.1_11410.t1 | 2 | 1 | TMC | 94 | 159 | 6.7e-20 | 71.5 | 9.0e-24 | 6.7e-20 | 71.5 |
| pfu_aug1.0_21769.1_11410.t1 | 2 | 2 | TMC | 237 | 254 | 6.7e-20 | 71.5 | 0.15 | 1100.0 | -0.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_21769.1_11410.t1 | gi|260800851|ref|XP_002595310.1| | hypothetical protein BRAFLDRAFT_87540 [Branchiostoma floridae] | 6.0e-36 |
Transcript
| Transcript ID | pfu_aug1.0_21769.1_11410.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21769.1_11410.t1 tttcaatgcccccaaggaaatagctaaaacccaggatcggaaacatggagaagataaaatcacattcaaagaaagaatct tggatggaattaaagaatcgactttaccgatgaaagaaaagcttaaagtacacagaatgcaggtacggtaccggaagagc aagcacacggagcagggggatgactacccgtttacatggagcatgttctgtctgtgggatcattctatatacaccagaag cggagtcaaaaacagactgaagtcatttagtactgaactgaagataggtttcagtgaattcgctgtaacatcaaacctcc ttgacctggtttacggtcaaggtcttgtctggttaggactgtacttctctcctttgcttgccatggtagccgtcatcaaa cttttcattgtgttctactttcgatatttcgttgccaaatttgccaatgtcccacccaaaaagatgtttaaagcgtccag atccgggacattttatctatttttattgctgatgacatggtttctgtgcattgttccagttggttatttcctctctgaac taacaccgtcgtggcactgtggacctttccaatctgagaagcgtgtatatgacgttatgggaatcaaccttagctctata tttacgggagatttcgcttgggtcaatgatgttgtccgatacatagggacagccattgttgtcatacctctcatcattgt attattgttggtgattttgtatttctacacaagggcaagttcctatagcagcctggtgaaagaactaaggacacaactaa tatttgaaagaagggtcgaacgaaagaaagtatttgcaaaggccttgtctgcaccagctggtagtgttggacgtgtaagt ggtacaagtatgtcaacgctgctagaagaaaattga |
|
Protein
| Protein ID | pfu_aug1.0_21769.1_11410.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21769.1_11410.t1 FNAPKEIAKTQDRKHGEDKITFKERILDGIKESTLPMKEKLKVHRMQVRYRKSKHTEQGDDYPFTWSMFCLWDHSIYTRS GVKNRLKSFSTELKIGFSEFAVTSNLLDLVYGQGLVWLGLYFSPLLAMVAVIKLFIVFYFRYFVAKFANVPPKKMFKASR SGTFYLFLLLMTWFLCIVPVGYFLSELTPSWHCGPFQSEKRVYDVMGINLSSIFTGDFAWVNDVVRYIGTAIVVIPLIIV LLLVILYFYTRASSYSSLVKELRTQLIFERRVERKKVFAKALSAPAGSVGRVSGTSMSTLLEEN |
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