Gene
| Gene Model ID | pfu_aug1.0_21813.1_18825 |
|---|---|
| Locus | scaffold21813.1 : 6145 ... 14325 : - |
| To GenomeBrowser | scaffold21813.1:6145..14325 |
| Genes list of scaffold | scaffold21813.1 |
| Synonym | pfu_aug2.0_48.1_26737 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_21813.1_18825.t1 | 2 | 1 | TMEM173 | 7 | 91 | 2.8e-16 | 59.1 | 0.00057 | 2.8 | 6.6 |
| pfu_aug1.0_21813.1_18825.t1 | 2 | 2 | TMEM173 | 257 | 426 | 2.8e-16 | 59.1 | 2.1e-17 | 1.0e-13 | 50.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_21813.1_18825.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21813.1_18825.t1 atggagcatccgctggaggaatacttctttattgcggatcaacccttcgtcctaaacactttccggcatgtagaagatga taatggagaggacgaagaaaccactcaacgtaaccttaatctaaatgtagccagattttgctacacaatgcaaatgattc tagaccatccagagatgaagaaacaatggaaaggcaacagagcacggcttgtccagtactgtgatggcggaaaagagtct gtcgaagatattcttctgaaagccatcaaagaagacttagctatatataatcgagaaaagattgattggtgcaacagcgg attatatcgcgaagagcagagctatgattatgatgcatatatctgtgcgttcaaggaagatatagaggaagaaaagaaga ttacagaatttctgaaaaggcatgatgtctccgttgcagaaggtagaagtgcaaatatgttaggcaacacacatttgatc gggaaatctagatggttaattttcctattgagcaaggccgccatgcatgatcctgaatttacgctggagtggcttggaac attgcaggaggtcctaaataaagggcacactctggttgtaccagttatactggaggaagatagagaatacggaattcccg aggtactacgatgggtgacttacatccagaagatggaaggtgaccaggacaactacatgcaaaggattttgaaaactata caaggtggtcctgttcccatggacatcaagtcatacctacctgctggtaatgtcgcctatggactagctcttggttacgt gaagaactacttgaatctcattttacaagatttaaatagtgcattcaacaaatgcagtgaaccatgtcaacgacattttt acattcttctgccacgatcctgtaagtgcaaaaataccctggaagaggagaacgatcattgcatagtcaccaaacacgat acaattctcctttatactgctccgaatggaaggaaatactcatgtgatatgtacaagttggtttctggacaaggccgaaa taagattgactatatccttggactgtacgcagcaccagttctctgtctataccagatgataatgatccacataggaggac ttaaggaggaagagatgtacaaacagagacaagagtttagtaccatattgtacggaatgctccatacacagctgggggat aaggcaaacctttgtcgctttgttgaatttgatgattccaagatgacggcgggacaggccatcctggatgctatcaaaag agaaggacagaattga |
|
Protein
| Protein ID | pfu_aug1.0_21813.1_18825.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21813.1_18825.t1 MEHPLEEYFFIADQPFVLNTFRHVEDDNGEDEETTQRNLNLNVARFCYTMQMILDHPEMKKQWKGNRARLVQYCDGGKES VEDILLKAIKEDLAIYNREKIDWCNSGLYREEQSYDYDAYICAFKEDIEEEKKITEFLKRHDVSVAEGRSANMLGNTHLI GKSRWLIFLLSKAAMHDPEFTLEWLGTLQEVLNKGHTLVVPVILEEDREYGIPEVLRWVTYIQKMEGDQDNYMQRILKTI QGGPVPMDIKSYLPAGNVAYGLALGYVKNYLNLILQDLNSAFNKCSEPCQRHFYILLPRSCKCKNTLEEENDHCIVTKHD TILLYTAPNGRKYSCDMYKLVSGQGRNKIDYILGLYAAPVLCLYQMIMIHIGGLKEEEMYKQRQEFSTILYGMLHTQLGD KANLCRFVEFDDSKMTAGQAILDAIKREGQN |
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