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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_21858.1_04179
Locus scaffold21858.1 : 37 ... 16005 : -
To GenomeBrowser scaffold21858.1:37..16005
Genes list of scaffold scaffold21858.1
Synonym pfu_aug2.0_289.1_30567

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_21858.1_04179.t1 gi|157817865|ref|NP_001100881.1| prolyl 3-hydroxylase OGFOD1 [Rattus norvegicus] 4.0e-29

Transcript
Transcript IDpfu_aug1.0_21858.1_04179.t1
Definition-
>pfu_aug1.0_21858.1_04179.t1
atgtcgacgacaagtgaagcaagtaccagtacagacatccagctgacacatatttgtattttacaggtaccagtacagac
atccagtttacccatatttgtattttacaggtaccagtacagacatccagctgacccagaagccattaagtcatatttgt
attttacaggtaccagtacagacatccagctgacccagaagccattctgtcattgtgtcatacctaacatcattaaggac
caggattttgtagaccggttacaagaggaaattctagatctgacattttcagagaaaaataacgatctgtacaagtttca
tcagagtttagaagacctaaaagtgatagagtcaccattaataagcaggttaaggtcattcatatataaagatttactga
agtggattcaagaggtaacgaggatagaactgaataataatgtggatatgtcatgtgcatcgtacaggtatacagttcat
aattggaacccggaactttctgtgaagctgcctgggttcagtaaaggagaaccaagggagatagtgaaatccatccatcc
aaaacggaacacttttgtgttttttgaagttggaccaacttcatttcaccaagtcaaggtcacaaaggttgataccaaga
aaacatgccttacgactagaaattcacatgaatatgaaagtcctattcctaatagaactagaatatttcacatggacaag
acctattttggtgacaaaattttaccttga

Protein
Protein IDpfu_aug1.0_21858.1_04179.t1
Definition-
>pfu_aug1.0_21858.1_04179.t1
MSTTSEASTSTDIQLTHICILQVPVQTSSLPIFVFYRYQYRHPADPEAIKSYLYFTGTSTDIQLTQKPFCHCVIPNIIKD
QDFVDRLQEEILDLTFSEKNNDLYKFHQSLEDLKVIESPLISRLRSFIYKDLLKWIQEVTRIELNNNVDMSCASYRYTVH
NWNPELSVKLPGFSKGEPREIVKSIHPKRNTFVFFEVGPTSFHQVKVTKVDTKKTCLTTRNSHEYESPIPNRTRIFHMDK
TYFGDKILP

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