Gene
| Gene Model ID | pfu_aug1.0_21886.1_40322 |
|---|---|
| Locus | scaffold21886.1 : 1 ... 2452 : + |
| To GenomeBrowser | scaffold21886.1:1..2452 |
| Genes list of scaffold | scaffold21886.1 |
| Synonym | pfu_aug2.0_1842.1_08604 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_21886.1_40322.t1 | 1 | 1 | Trypsin | 6 | 157 | 6.0e-33 | 114.2 | 8.9e-37 | 6.6e-33 | 114.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_21886.1_40322.t1 | gi|126723388|ref|NP_001075485.1| | coagulation factor X precursor [Oryctolagus cuniculus] | 9.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_21886.1_40322.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21886.1_40322.t1 ttaacagaattggtggatttgactatgatgtagctatagttcttgttaaaccaaacacaaggggatatatacggtacaaa cgtgatgtaagacctgcctatttgcctgacagagatttgaggatttttcctagaaaacattgttatgcttctgggtgggg acgaactactacagatttgtcgggcccgtttagtgactcgcttcaaattgcaagaacggacatactagatagaaatgatc aaagacgatgtaacgagtcatacaagggaatgttaactcagaatatgttatgtgccggatacctggatgctacaccgata gatgcgtgtgtaggggacagtggaggacctcttgtttgtaatattcaaaataaggacgtcgttgtcggtattatctcatg gggaacaataagatgtgcaatgaaaggataccctggaatctatgctaacgtacaggaactcttaccatggttggaatcat ttggctcctag |
|
Protein
| Protein ID | pfu_aug1.0_21886.1_40322.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21886.1_40322.t1 NRIGGFDYDVAIVLVKPNTRGYIRYKRDVRPAYLPDRDLRIFPRKHCYASGWGRTTTDLSGPFSDSLQIARTDILDRNDQ RRCNESYKGMLTQNMLCAGYLDATPIDACVGDSGGPLVCNIQNKDVVVGIISWGTIRCAMKGYPGIYANVQELLPWLESF GS |
|