Gene
| Gene Model ID | pfu_aug1.0_21940.1_33224 |
|---|---|
| Locus | scaffold21940.1 : 226 ... 5828 : + |
| To GenomeBrowser | scaffold21940.1:226..5828 |
| Genes list of scaffold | scaffold21940.1 |
| Synonym | pfu_aug2.0_3427.1_25745 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_21940.1_33224.t1 | 3 | 1 | DNA_pol_B_2 | 76 | 148 | 2.3e-20 | 72.6 | 0.012 | 93.0 | 1.4 |
| pfu_aug1.0_21940.1_33224.t1 | 3 | 2 | DNA_pol_B_2 | 291 | 515 | 2.3e-20 | 72.6 | 8.3e-24 | 6.2e-20 | 71.3 |
| pfu_aug1.0_21940.1_33224.t1 | 3 | 3 | DNA_pol_B_2 | 642 | 727 | 2.3e-20 | 72.6 | 0.00039 | 2.9 | 6.4 |
Transcript
| Transcript ID | pfu_aug1.0_21940.1_33224.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21940.1_33224.t1 atggagtgggagaatgtaatacagcaaaatattgctgacgacataattgaagaatgtatacaatctaaagacaaagactt tgaagacatactagaatcttcatttcacgagggcgagtctttactcgaagatataccatacgaacgtatctatgacacgg agaagaaggaggagggagatttttctgatatagttgatggatctttccacagaaacgattccctccttaacgagtacgac ataaacgcatttccagtgattcagttcggaggtggtcccaaaaaagaatacgacataacacttctcaaagaaaaagcatt acaaaaaatgggagccacagatgtcacgtatgaattgactttcaatgatataatgtttaaagaaaagaaacaaatgaagg atgtacttcaaactttgaaaaaagcctttaaagatatgatagacaaagtgaagcaggatctgcaacctggggatattatg agaggcgtcgttcataatgatgccctggatatacccatttttgtttccttccgtcccatggaagctgatgcaatgctgga tgcagtaattaatgtattgaacagcgaggagagccttccttttgattcctcttgtcgtgtagacattggtgccatcaaat accctaggggggaagacccgtgtgtcaaactgcctgtaaaatgtgtgaacataaagacgtggcatccaacagcaaatgtt ctggatgcggaagccgctgttcaatctgttccaaagtggacacaaaaaccaaacaattcaaacagccgccgtgtcaagac acctgtggacactgggaacagtttttttatccgttgtacgaataaggtgcgtggatgtttcacgaaaaccataaaaggct tcaccgttatttttcacaatttgtcgtacgacggtcaattccttctgcaatacttggtctcacaatccatcaaaccctct ttcgtcatctatcgcgtaagcaagattcaaatgtttaacgtacctggagtgtcaatgagagtgatcgactccttcaactt tttaccaattgcacttgctaaactaccgaaggcgtttcaattggaatcattggtcaaaggatatttccctcattttttca cttgtcgagaaaatctgaactacgttgggtcttatccacccgtcgaaacctacggaccgaatgcaatgtccatcgatgaa aggaaaaagtgtctgacctggtatcattccaagatcgaaaacaacgaaatattcaattttcgcgaagaaatgatcaaata ttgcaagagtgacgttgacattttacgtcgcgcttgtcttaagttcaaaaaccttgtcacggacgtcaccaaacaggatg gtggtgtcggcatcgacgcatttgcatctactactattgcgtcactgtgcatggaggtgttcaaatccaaatttctacgc gaagaatggaaagtgctgctcggtacaccggtggctcccaacgaggcgaccaataatgtctgccaaaggaaagatgacaa agagaaatggttggacgctgtcaaactgaacggcagattgacgatttttcacgagggtaattggaaaaaagcccaagtgt taaaatccaccaccagtctcgaaattaaaaagacggtctttgtcaagtcgcctatagccagaccaccgcctaatggttat acgtcaatgactagattcagtaaaaaatccattcaatggttggaatgggttatgtatcgcaaaagaattcagggtcaaac actggagattcaacatgcattgaacggtcgtggcgagtatcgagttcccggcacaaagtattccctagacgggaaagacg atgttccaaatcccgtctccggtcatacggctttggagctttttaacatgacgcgtgtaaaagaacacgctacgcaatct cggaatgaaggtgagcatcaacaacaaaccccctgtatctgtacaaatgaggcaagatcatttgttggcactttctgtac accagaaatcgagaaggcgatggaaaagggatacaagatagttaaggtctacgaagtgtaccactggtcggagacgacag aatacgatccagacttgaaagagggaggtctgtttgcaaattacatcaacatgttcttaaagatcaaacaggaagccagt ggtagaccggaatgggtgaaaacagaagccgatctagaaaagtacatcgaaatgtacgagaaaagagaaggtattcgcct cgatgcaagtcaagtggaatttaactccggtatgcgtaatttggccagcgcatga |
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Protein
| Protein ID | pfu_aug1.0_21940.1_33224.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21940.1_33224.t1 MEWENVIQQNIADDIIEECIQSKDKDFEDILESSFHEGESLLEDIPYERIYDTEKKEEGDFSDIVDGSFHRNDSLLNEYD INAFPVIQFGGGPKKEYDITLLKEKALQKMGATDVTYELTFNDIMFKEKKQMKDVLQTLKKAFKDMIDKVKQDLQPGDIM RGVVHNDALDIPIFVSFRPMEADAMLDAVINVLNSEESLPFDSSCRVDIGAIKYPRGEDPCVKLPVKCVNIKTWHPTANV LDAEAAVQSVPKWTQKPNNSNSRRVKTPVDTGNSFFIRCTNKVRGCFTKTIKGFTVIFHNLSYDGQFLLQYLVSQSIKPS FVIYRVSKIQMFNVPGVSMRVIDSFNFLPIALAKLPKAFQLESLVKGYFPHFFTCRENLNYVGSYPPVETYGPNAMSIDE RKKCLTWYHSKIENNEIFNFREEMIKYCKSDVDILRRACLKFKNLVTDVTKQDGGVGIDAFASTTIASLCMEVFKSKFLR EEWKVLLGTPVAPNEATNNVCQRKDDKEKWLDAVKLNGRLTIFHEGNWKKAQVLKSTTSLEIKKTVFVKSPIARPPPNGY TSMTRFSKKSIQWLEWVMYRKRIQGQTLEIQHALNGRGEYRVPGTKYSLDGKDDVPNPVSGHTALELFNMTRVKEHATQS RNEGEHQQQTPCICTNEARSFVGTFCTPEIEKAMEKGYKIVKVYEVYHWSETTEYDPDLKEGGLFANYINMFLKIKQEAS GRPEWVKTEADLEKYIEMYEKREGIRLDASQVEFNSGMRNLASA |
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