Gene
| Gene Model ID | pfu_aug1.0_21942.1_69453 |
|---|---|
| Locus | scaffold21942.1 : 6760 ... 18379 : - |
| To GenomeBrowser | scaffold21942.1:6760..18379 |
| Genes list of scaffold | scaffold21942.1 |
| Synonym | pfu_aug2.0_21.1_03425 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_21942.1_69453.t1 | 3 | 1 | WD40 | 726 | 761 | 5.4e-09 | 35.5 | 0.029 | 210.0 | 1.9 |
| pfu_aug1.0_21942.1_69453.t1 | 3 | 2 | WD40 | 788 | 814 | 5.4e-09 | 35.5 | 0.00027 | 2.0 | 8.4 |
| pfu_aug1.0_21942.1_69453.t1 | 3 | 3 | WD40 | 1042 | 1068 | 5.4e-09 | 35.5 | 4.8e-08 | 0.00035 | 20.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_21942.1_69453.t1 | gi|260799071|ref|XP_002594523.1| | hypothetical protein BRAFLDRAFT_124992 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_21942.1_69453.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21942.1_69453.t1 agaactacgtgatgctggagatttggaagacagacttgtacaaagacattttgactgcatcagtgtcaatgatcagatgg cgaggaatgaagaagtgagaagacttcaggcggaacttaaagaaaggataaagaggaaaatgggaaagactggaataaag gaatttaaagtaacatggagggatggaggtatcaaccctaagttacacaaagatcacgagatgtaccttgatcagttttg taaggagctttatagcggtgtcgttaatttgacagaaaacgctgtactgaggcagaagaacaaaatacgatactcagaat actacagtgaatatcaggaggttctacatcatttacacttctgtcaggtcaaatgtgagactttctgtggacgggaggat gtactacagagcatcaaggggtacctcaatgatgcttccatgaggaaacctctggtcctccatgccgcctcaggaggagg gaaaacctcagtgatggccatggcaatgaaaagtctgaagacatggtancttgatcagctatctaagacacatgatgctt actccatgtcatggttacctctgtctttaccgtcaaatgtcaagttagtagtttccactctccctgaagaacatggaatt ctagataatctgaaggaacttcatccagaggaaaggttttatgttcacttgccaaaactaccacgtcaaacaggttgtga aattatcgactcatatctagtcaagaaaaaacggaaagtgactcatgtacaacagcgcctcattttgaacaccttcgaca aagcaccttctccgctgttcttgaaactgattctggaccaagccgtgacatggaactcttacagtccagaacacgagtta gttttacaagactcagtaagaggggctatcaatatgttatttgacaatctagaggcaaagtttggtagcattgtgacaag ccatactttaggctactttacaatagctctaaacggaatctcagaaaatgagctggaggatgttttgtcatgtgacgatg aagcgctgaatgacctgtacagatatcatgatcctcctgttgagggtattgtgagatgccccccagttattgtggcaagg attcagtatgacatcaaggagtatatcgtggagagaatgtcacatgagaagaagcccgtactaatacctgtgtacccttg tctggccccacggagggatacatcagctgccctgtcagatatccctgagggtgtggtcactgtactgtctgaatgtgggg aaggagtactgctgagattacatggagataaatatgaaaaagaggaagaacttattcatgggatctatgaattctccaca aaaaatttaactctagtcaacttacctgtcatcactgatcaaaacatctttcccttgctggacaagtctggtaaaacagt ggtttatacagatgaacgttctctgcatgtcctaccaatgggaagcaataaaacacactcaaagaaactgacagattttg atccatctgtaaatggacagggagttctatccatggagtatagctcagatacccagtatgtagtgcttttgtttgagaac agtcaacttatactagtagaaccaacaggacttcaggtagttggtaagtggactcttcaagacaaccctgaagacatttg tggcatactctgtacaggtgctgagaatctacaaatcattgtggcttctacaaccatcagtggcataaccaaggctgagt gtgggaaatggcagtttctcactgcggacagtcaagaagagaatgcacatatggttgatgagaatatcagcaagaagcag gtaggactatgcatgtcagagaggttgtattttggaggatttaatagagaggaggacgctgtcataacgacatggagcct gaagaataaacaggaagtatctaaaatccagctgccttcaaagatttgtagcatcagtccagccaagtccagacctgatg ctggtgtagtgttagagacgggtcaggtttggttgttgaacttggatagtggatccataacatacaaacttgtcacagac aatcccacatatgagctgagcattagctggctccatcatttggccatgttaggtgataccaaaggccagatatatctgtt tgataccaacactggccaagaaaaggggagttttccagcccatgttcactcactgtctctactacagacgctggatgact ttgtaattacacagtctagaagtgatgatctaaagatttggtcccttgtggaaattattgaggatatcagggaaaatact ggagagaagagcaaagaaatagatggtttactggctgagaaacatgtcaaatgctttgatatacatccaattggaaagga gttgatgaccgtctgtgataaaggaatactgagagtatggaatatggaggagactaaactcacaaaggagatgtcaatag gtatcatgccaagtaaactgtgcatcacaaatgatggcatactcatagcgcttgataaagtgcagaaacgtattgcagct attgatacagaggacatgaaagttctgaacatagaattcccaacctgtgtaatggacttcgtccctaacaaaaagcagac gacagtgtacatgataagtcagggtaagaagcaccaggatgtaggacaattagacttgtccacgatgacgtacaagtcca agttccctttgaaaccctcaattaaatatgcctcactagatatcctgttgagtggcagtgaaagatacttggtgctgcaa tcagagctgaccaaagaaggttatgatcaggtcatcagttcatgtaaaaaacaaggatcatttctacctcagcatcaccc ctaccagttcatggcagtagatctctcacaagctaacggaggcctgatgtactgctatagagtgatgaccaaaatacccc atctaggagaagccatatgtgccacatcaggaaacactatggtagccaccacacggcgctgggtcatattctgggacatt gttgtaggtaaagcagaccagcgagtgagtaagaataaagacataggtatgatgtactctccgcactgggtggagatcga gggaacatccaaggctatggcactcagtcctgacggtaatatactggtgactgggtcagaggacggcttcgtctttatat gggaaatggatactggattccctgtaggagaacaggcaccaaaaactaaacactcatctccttgttggaaaccgctctag |
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Protein
| Protein ID | pfu_aug1.0_21942.1_69453.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_21942.1_69453.t1 ELRDAGDLEDRLVQRHFDCISVNDQMARNEEVRRLQAELKERIKRKMGKTGIKEFKVTWRDGGINPKLHKDHEMYLDQFC KELYSGVVNLTENAVLRQKNKIRYSEYYSEYQEVLHHLHFCQVKCETFCGREDVLQSIKGYLNDASMRKPLVLHAASGGG KTSVMAMAMKSLKTWXLDQLSKTHDAYSMSWLPLSLPSNVKLVVSTLPEEHGILDNLKELHPEERFYVHLPKLPRQTGCE IIDSYLVKKKRKVTHVQQRLILNTFDKAPSPLFLKLILDQAVTWNSYSPEHELVLQDSVRGAINMLFDNLEAKFGSIVTS HTLGYFTIALNGISENELEDVLSCDDEALNDLYRYHDPPVEGIVRCPPVIVARIQYDIKEYIVERMSHEKKPVLIPVYPC LAPRRDTSAALSDIPEGVVTVLSECGEGVLLRLHGDKYEKEEELIHGIYEFSTKNLTLVNLPVITDQNIFPLLDKSGKTV VYTDERSLHVLPMGSNKTHSKKLTDFDPSVNGQGVLSMEYSSDTQYVVLLFENSQLILVEPTGLQVVGKWTLQDNPEDIC GILCTGAENLQIIVASTTISGITKAECGKWQFLTADSQEENAHMVDENISKKQVGLCMSERLYFGGFNREEDAVITTWSL KNKQEVSKIQLPSKICSISPAKSRPDAGVVLETGQVWLLNLDSGSITYKLVTDNPTYELSISWLHHLAMLGDTKGQIYLF DTNTGQEKGSFPAHVHSLSLLQTLDDFVITQSRSDDLKIWSLVEIIEDIRENTGEKSKEIDGLLAEKHVKCFDIHPIGKE LMTVCDKGILRVWNMEETKLTKEMSIGIMPSKLCITNDGILIALDKVQKRIAAIDTEDMKVLNIEFPTCVMDFVPNKKQT TVYMISQGKKHQDVGQLDLSTMTYKSKFPLKPSIKYASLDILLSGSERYLVLQSELTKEGYDQVISSCKKQGSFLPQHHP YQFMAVDLSQANGGLMYCYRVMTKIPHLGEAICATSGNTMVATTRRWVIFWDIVVGKADQRVSKNKDIGMMYSPHWVEIE GTSKAMALSPDGNILVTGSEDGFVFIWEMDTGFPVGEQAPKTKHSSPCWKPL |
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