Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_219779.1_64831
Locus scaffold219779.1 : 1 ... 630 : +
To GenomeBrowser scaffold219779.1:1..630
Genes list of scaffold scaffold219779.1
Synonym pfu_aug2.0_360.1_00655

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_219779.1_64831.t1 1 1 Fasciclin 2 74 7.8e-19 67.9 5.9e-23 8.8e-19 67.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_219779.1_64831.t1 gi|37521719|ref|NP_925096.1| 1.0e-16

Transcript
Transcript IDpfu_aug1.0_219779.1_64831.t1
Definition-
>pfu_aug1.0_219779.1_64831.t1
gtgccggaccattcaccgtctttgccccaaccgatgccgctttcaatgctctcccaccaggaactcttgataaccttttg
aaaaataaaacagctcttaccgacgtactgacataccacgttgtaagtggaaccttttatagtgccggtttggccagtgg
cgctgtaccaaccgttgaaggaaaatctgtcaatattgcagtcgcttcaggcggtaggtattttcttggaactttacctt
tttatgcatga

Protein
Protein IDpfu_aug1.0_219779.1_64831.t1
Definition-
>pfu_aug1.0_219779.1_64831.t1
AGPFTVFAPTDAAFNALPPGTLDNLLKNKTALTDVLTYHVVSGTFYSAGLASGAVPTVEGKSVNIAVASGGRYFLGTLPF
YA

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