Gene
| Gene Model ID | pfu_aug1.0_22.1_14740 |
|---|---|
| Locus | scaffold22.1 : 342481 ... 357165 : - |
| To GenomeBrowser | scaffold22.1:342481..357165 |
| Genes list of scaffold | scaffold22.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_22.1_14740.t1 | 1 | 1 | Herpes_teg_N | 234 | 385 | 5.9e-12 | 45.3 | 2.9e-15 | 1.4e-11 | 44.1 |
| pfu_aug1.0_22.1_14740.t1 | 1 | 1 | OTU | 519 | 625 | 4.9e-14 | 52.9 | 3.0e-17 | 1.5e-13 | 51.4 |
Transcript
| Transcript ID | pfu_aug1.0_22.1_14740.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_22.1_14740.t1 atgccaagaaaagcaaatcgaagaagtaaagtaggctgtacacaaaattctgacagcaatatcgatggacgccattccat tccattgtcaagccaacaaaacaaagaaaaagattcttcttcgatgctgtctttgcaacaacaaattgagacacagactg cttctatggggaaagattcacccaagcaacaaaataacaaaaataatgcctctatgggactggcatctccttgtgaggaa atgtccctggccgcttggaggttggcctctccttgtgagaaaacgcctctgaatgcccgggggttggcacctccctcggg aagtcgtctgagtgctacagatgttagcatgccaccgagccctgatactccagcgtgggtatgtaccccagcgcgggtac cctcgccaaagcgcggcgttgcaggtcagacgcaaactgggataagaactcatttcacggcaatggaatgtagacccagt ataaatgtattattgagaaaagatgcaaggaatatagaatcggctactaaactgaactatgaaacgagtaccaaactgaa ctatgcaacaaatacatgtactgagatgaactatgaaactactttgcattcattgtatcatatgtcgtcaacaacaaatc agactgagagaagcaaaaagcaatgttctaatataacaaaggctatacaagggaactttcaccagggaaactgcatgttt ggtgaaaatgcaggtaatcaatgtgttccaaactgtttaatagcaggtatttttggtacgctaaaatctgtacatgtatg gacttcagaagatatggacaatattcttgtgacggggaatgaactatattcttttctaagagccagttcgttcatgaatc ataatcacttattggtacacgaacttcctagacagattgacgttttccataccctctatagcattcatattgatgaatct aaaatctctgtgatatcacctaaagataaaataaagcaagatatgtctcaatttaatgtgttacctttagatgaggcaat actactgtcactagaaaaatatcctactgcattcgtttgctttgctggcagcactgtgctaataggtagatcagagtttg gattttttatctatgatccacattcgcggtcagagaccggaatgattgatatcgatggtaaaagtacatgcttgctgatg acggatatcggagatataagtgaacatttatatgctctaggagaatcaatgaatgtatccggtgcaattatgattgaact tactgggttcaaaatagaaaatgtaaattcatctagtcacaagcatatacaaaatgtacaaccgcactgtggaacagaaa atgtatcagatgatgatgatgctgttatctattcatgcaaggaagcacctatcaaacctgactttaaattattgtgcaaa ggaacacaaaggcaaatatgttcgaagcttcatctcaagtacgaaaatactaaagtatacagcaacaggctaattaaaaa tgccgaaaagcccaaaacttggcacagagtcatggctgatggaaattgcttctttagagctttatcatttgccttgagca acacggaggagaatcacaacaagataagagaacttgtctgtgaacacgcattatcacaaccagatgagtttacttcaata ttacgaggaggacatgagtcagtattatcttatttagaaacgacaaagatgagtgaatattgtgtttgggcaactgaatt cgagatatatgtggcttctagtatgttaaaatgtaccatatacaccttcagcaatggtacttggatcaagtttgcaatgc cttcagtagatggaaaaaatattcctgataaaaataagatattcttggaccatgttaatggtaatcactatgacgttgtc ttgtctacagaatctgaaacaatggagggacaacataattcaaataaggttcaaggtctaaaagttatacagcgaaaaag aaaagacctcaaagaaagagatgcattgagaaaacgcttgaaaaaacaagaagagttgatagatgaaaagaacggtcatg ttgacgagctaaacacgcgagacaaagacataatgaagaacagccctgtcgacaaatatgtcgaaaattctactctttgt gacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattcctattcagatgaaggacg agacgagtgctgtaaggtagacttaaagatatgtcatacatgtcaacgtaaaatcatggctggatgtataccaccagaat cttcctcaaataatatgagccttgacgaaattccagatgaactaaaagcactgaacagtcttgaggagaacttaattgca aagcacatcacttttatgaagttggcactgctaccacaaggagcacaaaatgctattcatggaccagttgtctgtgttcc ttcgaatctaagcaaagcaaaaagtttaccaagacaagaagacaatgacctcatccttcgcgtaaaactaaaaagaaagt tgagttacaagggtcattatgactataaatttgtaaacacaagtcatgtatacaatgcactgcaatatttgaaggaaaat aacaaatggtacaaagacacggacataaatcaatcggagaatgaaaagaattttctagcagaatctacagtcaaagaaca acacggccaaaatagacacacagatgatacaaaagattgttctagcaacagacccgacgaaataccacctaatgaaaatg aaccttcagaggaatacggcgtacaatacgatacgtgcttacaaccacctgatataggacaagaagtgcttgatcattac tttgatgaagtatttaatatagcccctgcggagggaatgaatcctgtaaaaatgttgcaagaaaaaggcaatgaagcaaa gtgttttcctattctatttccgactggagaaaattcattcgatgaagcacgaaaactaccaatttcccttagcagatact ttaataacagattaatgaatgcggacaacagatttgctcaacattcaaattatctcttctatgcccagtatttatctgaa ctaaaacaagtcattgataaaactcaaatttcacttcgaaagacaactgctaagggggcatctggagaaaatgtaactgc agagacgctacaagacaaggcaaaactaaacagctctggcggcaaagttgtagccgatccgactgtttgtgagaaaatca cgtccgatgtcgtgtccgatgatgaagacgacgacttgtatccagcatgcgcggttaccagggcgatggccaggaacaga ctgaaagaggctgagagtacttctgcacttaacgaggaccatccctccaaaagtatagacctttctgacacattcatgtc taccatttatgacaacgtgcctgagacgtcggtaccacttcatgttgacgagtctccgacagtacctggtgatgattacc atccgccattagacagagatacagatgaataa |
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Protein
| Protein ID | pfu_aug1.0_22.1_14740.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_22.1_14740.t1 MPRKANRRSKVGCTQNSDSNIDGRHSIPLSSQQNKEKDSSSMLSLQQQIETQTASMGKDSPKQQNNKNNASMGLASPCEE MSLAAWRLASPCEKTPLNARGLAPPSGSRLSATDVSMPPSPDTPAWVCTPARVPSPKRGVAGQTQTGIRTHFTAMECRPS INVLLRKDARNIESATKLNYETSTKLNYATNTCTEMNYETTLHSLYHMSSTTNQTERSKKQCSNITKAIQGNFHQGNCMF GENAGNQCVPNCLIAGIFGTLKSVHVWTSEDMDNILVTGNELYSFLRASSFMNHNHLLVHELPRQIDVFHTLYSIHIDES KISVISPKDKIKQDMSQFNVLPLDEAILLSLEKYPTAFVCFAGSTVLIGRSEFGFFIYDPHSRSETGMIDIDGKSTCLLM TDIGDISEHLYALGESMNVSGAIMIELTGFKIENVNSSSHKHIQNVQPHCGTENVSDDDDAVIYSCKEAPIKPDFKLLCK GTQRQICSKLHLKYENTKVYSNRLIKNAEKPKTWHRVMADGNCFFRALSFALSNTEENHNKIRELVCEHALSQPDEFTSI LRGGHESVLSYLETTKMSEYCVWATEFEIYVASSMLKCTIYTFSNGTWIKFAMPSVDGKNIPDKNKIFLDHVNGNHYDVV LSTESETMEGQHNSNKVQGLKVIQRKRKDLKERDALRKRLKKQEELIDEKNGHVDELNTRDKDIMKNSPVDKYVENSTLC DXXXXXXXXXXXXXXXXXXXSYSDEGRDECCKVDLKICHTCQRKIMAGCIPPESSSNNMSLDEIPDELKALNSLEENLIA KHITFMKLALLPQGAQNAIHGPVVCVPSNLSKAKSLPRQEDNDLILRVKLKRKLSYKGHYDYKFVNTSHVYNALQYLKEN NKWYKDTDINQSENEKNFLAESTVKEQHGQNRHTDDTKDCSSNRPDEIPPNENEPSEEYGVQYDTCLQPPDIGQEVLDHY FDEVFNIAPAEGMNPVKMLQEKGNEAKCFPILFPTGENSFDEARKLPISLSRYFNNRLMNADNRFAQHSNYLFYAQYLSE LKQVIDKTQISLRKTTAKGASGENVTAETLQDKAKLNSSGGKVVADPTVCEKITSDVVSDDEDDDLYPACAVTRAMARNR LKEAESTSALNEDHPSKSIDLSDTFMSTIYDNVPETSVPLHVDESPTVPGDDYHPPLDRDTDE |
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