Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_22010.1_69461
Locus scaffold22010.1 : 8062 ... 17599 : -
To GenomeBrowser scaffold22010.1:8062..17599
Genes list of scaffold scaffold22010.1
Synonym pfu_aug2.0_1629.1_31805

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_22010.1_69461.t1 2 1 Aldedh 2 107 0.0 259.0 1.30321e-43 1.9e-39 135.2
pfu_aug1.0_22010.1_69461.t1 2 2 Aldedh 109 225 0.0 259.0 1.2e-39 1.8e-35 122.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_22010.1_69461.t1 gi|291221653|ref|XP_002730826.1| 0.0

Transcript
Transcript IDpfu_aug1.0_22010.1_69461.t1
Definition-
>pfu_aug1.0_22010.1_69461.t1
agtttggagacgatagataatggtaagccgtatgaggagtcgttgggagacgtagattgtacgatagatgtcttcagata
ctatgctggatggagtgataaaaacatgggaaggaccattcctatcgatggagattttttctcgttcacaagacacgagc
ccgttggtgtttgtggacagatcataccttggaattatcccatcatgatggtatcatggaagcttggtccagctctggcc
tgtggtaatactgtagtgatgaaacctgctgaacagactccactcactgcgctgtattgtgctgccctaataaaggaagt
aatggatactgctgcatactgggcacatgccgctataatgaacaaccatggccagaactgctgtgcgggatcaaggacgt
ttgtggaggagtccatttatgacaagtttgtggagatttcaaagactctagctgaaaatagaacagttggtgacccattt
gttgatggcactcagcagggtccacaggttgaccaggagcagtatgataagatcctgagttactgtgagtccgggaagaa
ggaaggtgccactttacagtacgggggagagaaggctgcagataaagggttctttgtcaaacctactgttttctctaatg
tcactgacaacatgagaatagccaaagaagaggttaccatcatgataccggagaagaattcgtaa

Protein
Protein IDpfu_aug1.0_22010.1_69461.t1
Definition-
>pfu_aug1.0_22010.1_69461.t1
SLETIDNGKPYEESLGDVDCTIDVFRYYAGWSDKNMGRTIPIDGDFFSFTRHEPVGVCGQIIPWNYPIMMVSWKLGPALA
CGNTVVMKPAEQTPLTALYCAALIKEVMDTAAYWAHAAIMNNHGQNCCAGSRTFVEESIYDKFVEISKTLAENRTVGDPF
VDGTQQGPQVDQEQYDKILSYCESGKKEGATLQYGGEKAADKGFFVKPTVFSNVTDNMRIAKEEVTIMIPEKNS

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495