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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_22031.1_47492
Locus scaffold22031.1 : 4236 ... 10926 : +
To GenomeBrowser scaffold22031.1:4236..10926
Genes list of scaffold scaffold22031.1
Synonym pfu_aug2.0_32.1_06797

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_22031.1_47492.t1 1 1 PRK 107 164 1.0e-09 38.2 8.6e-14 1.3e-09 37.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_22031.1_47492.t1 gi|242021778|ref|XP_002431320.1| uridine cytidine kinase I, putative [Pediculus humanus corporis] 3.0e-19

Transcript
Transcript IDpfu_aug1.0_22031.1_47492.t1
Definition-
>pfu_aug1.0_22031.1_47492.t1
atgaattcagcgttcggaaagaaaggaaaaccggtaccatcgtttaaacctggagatcatgtgattgtccgagattacag
aggtaataaatggatcaatggcacgatcgaatctctactagggccgttaaactgtacagtgaaaacagacttcggttcat
tatggaagagacacgtggatcaaatcaggaaaacggaatgcagaaataaaacggagttttccgaaacacgatatgacgag
cgcgtgccagtgacaccatgcactatttcagttccgtgtaacgattcagtatctaccgacaatgatcataacaatgtgtc
agaatctgtattagatgagaagcagcaccagttagctgccgagaacgagtataactttgaccatccggacgcctttgatt
acgaactgctcggtcagactctgaaaagactcaagtctggcaagaaggtggaagtgcccatatataacttcatcacacat
agcagggaagatacgagtggggagaaaataaagttgcaatag

Protein
Protein IDpfu_aug1.0_22031.1_47492.t1
Definition-
>pfu_aug1.0_22031.1_47492.t1
MNSAFGKKGKPVPSFKPGDHVIVRDYRGNKWINGTIESLLGPLNCTVKTDFGSLWKRHVDQIRKTECRNKTEFSETRYDE
RVPVTPCTISVPCNDSVSTDNDHNNVSESVLDEKQHQLAAENEYNFDHPDAFDYELLGQTLKRLKSGKKVEVPIYNFITH
SREDTSGEKIKLQ

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