Gene
| Gene Model ID | pfu_aug1.0_2204.1_01008 |
|---|---|
| Locus | scaffold2204.1 : 1 ... 8925 : - |
| To GenomeBrowser | scaffold2204.1:1..8925 |
| Genes list of scaffold | scaffold2204.1 |
| Synonym | pfu_aug2.0_353.1_10653 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2204.1_01008.t1 | 5 | 1 | SRCR | 83 | 168 | 0.0 | 239.1 | 4.3e-15 | 2.1e-11 | 44.0 |
| pfu_aug1.0_2204.1_01008.t1 | 5 | 1 | SRCR_2 | 87 | 123 | 1.2e-16 | 60.7 | 8.7e-05 | 0.43 | 10.8 |
| pfu_aug1.0_2204.1_01008.t1 | 5 | 1 | Hepsin-SRCR | 91 | 122 | 4.6e-06 | 26.8 | 0.0048 | 24.0 | 5.2 |
| pfu_aug1.0_2204.1_01008.t1 | 5 | 2 | SRCR | 204 | 287 | 0.0 | 239.1 | 5.3e-18 | 2.6e-14 | 53.3 |
| pfu_aug1.0_2204.1_01008.t1 | 5 | 2 | SRCR_2 | 211 | 238 | 1.2e-16 | 60.7 | 4.2e-05 | 0.21 | 11.8 |
| pfu_aug1.0_2204.1_01008.t1 | 5 | 2 | Hepsin-SRCR | 213 | 238 | 4.6e-06 | 26.8 | 0.011 | 53.0 | 4.0 |
| pfu_aug1.0_2204.1_01008.t1 | 5 | 3 | SRCR | 304 | 391 | 0.0 | 239.1 | 1.2e-21 | 6.1e-18 | 64.9 |
| pfu_aug1.0_2204.1_01008.t1 | 5 | 3 | Hepsin-SRCR | 306 | 339 | 4.6e-06 | 26.8 | 0.0011 | 5.4 | 7.2 |
| pfu_aug1.0_2204.1_01008.t1 | 5 | 3 | SRCR_2 | 316 | 345 | 1.2e-16 | 60.7 | 2.1e-06 | 0.01 | 16.0 |
| pfu_aug1.0_2204.1_01008.t1 | 5 | 4 | Hepsin-SRCR | 377 | 423 | 4.6e-06 | 26.8 | 0.13 | 630.0 | 0.6 |
| pfu_aug1.0_2204.1_01008.t1 | 5 | 4 | SRCR | 406 | 493 | 0.0 | 239.1 | 7.2e-20 | 3.6e-16 | 59.3 |
| pfu_aug1.0_2204.1_01008.t1 | 5 | 4 | SRCR_2 | 412 | 443 | 1.2e-16 | 60.7 | 9.9e-07 | 0.0049 | 17.0 |
| pfu_aug1.0_2204.1_01008.t1 | 5 | 5 | Hepsin-SRCR | 417 | 441 | 4.6e-06 | 26.8 | 0.014 | 69.0 | 3.7 |
| pfu_aug1.0_2204.1_01008.t1 | 5 | 5 | SRCR | 512 | 568 | 0.0 | 239.1 | 3.4e-10 | 1.7e-06 | 28.2 |
| pfu_aug1.0_2204.1_01008.t1 | 5 | 5 | SRCR_2 | 524 | 545 | 1.2e-16 | 60.7 | 0.0046 | 23.0 | 5.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2204.1_01008.t1 | gi|115714041|ref|XP_001191226.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_2204.1_01008.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2204.1_01008.t1 atgtatgttatcacccgaggagtccgacaggtggtcggggccctgtcttctctaaagagaattggacaggtcgtccttgc tcctttaatgagtcttgttgtgcttgtccactctgtgttttctcctttgtttcacatttttgtgtttcggtacttcgacc gagtcctgttgaagagcataaagcctatacattcgcatgaaatgcgcattacataatcggatcttattcaattggtaaat ggcggagagaactatggcatcttacaaattcaaatgaatggcacatggaagacgctatgtgcctggccaaagtttggaga tggagatgctactgttgcatgccgggaactgggatactccagggggtcgatgctaccgttagctgcttttggtacatttt ctgctgaatacaccgcacctttcaaaggatgtagtggacaggagacgagtttttctgcctgcaattttgacgaaaattat actcctaatgtctgtgggactcaaaatacctattacggctcaatttggtgcactaatgaaacagtaacagatctcgggct cagtgtcgaaatattgcccgttgatgaaagcaatacaacgagaagctttggaccaacgagaatatccgctagaggacaag taggtcagatatgtacatcctactggagtgaggaggacgccaatgtcacgtgctctgagctggggtatcgtggaggggtg accacggtataccctgccaccgactctgaacctttccttctgactggtattcagtgtacaggatcagagagacgactggc agattgttatacagaggtacagatatgttatgattctggtcttagagctggagtagtctgctttgatcgatcagaaccag tcgtacatcttgaatttaaagagaatgattatggtcgcgtcatcatagaagttgacggccggaatggtacaatttgtaac gatcagttcaactctctggatgctgaggttgtctgtagacagatgggttacgtcacaggtgctgaaatgcatggccccca tatgccaataaacttgccgtatgtgctggctaacgtacaatgtaccggttcagaaacgtctattttatcatgtaagagtg acggttgggacatggacaacaactgtacgtcaggagaggccgcggtattctgttacgacagcgttaggatagcattaggt caaactaatgacgaggtgtccatggggctagtggaggtataccaagacaggttctggacaacactatgtagtacagagtt cgacaagaacgacgctgacgtagtgtgtagacaactaggatatcccaagtccaaagtcctactccctgggatatttggaa gaccctaccatgctctgtatacaacgtccatacgctgtcatggcaacgaaacgtccttgttagactgcccccacttgata ggaagctgtagatcttatgactatgccactataatctgtatcaaagatatggtttctgacgatatgagtttatcattgga taatgacgttggaggtcgggtgattgccacacagtacggtataaggggtacggtgtgcaggacgggctgggacaacaggg acgctagggttgtgtgtaggatgtacaattaccagggtggacaagtatacggtacacaggaagtcaccaacagataccga cctgtttgggtatccgatgtgcag |
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Protein
| Protein ID | pfu_aug1.0_2204.1_01008.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2204.1_01008.t1 MYVITRGVRQVVGALSSLKRIGQVVLAPLMSLVVLVHSVFSPLFHIFVFRYFDRVLLKSIKPIHSHEMRITXSDLIQLVN GGENYGILQIQMNGTWKTLCAWPKFGDGDATVACRELGYSRGSMLPLAAFGTFSAEYTAPFKGCSGQETSFSACNFDENY TPNVCGTQNTYYGSIWCTNETVTDLGLSVEILPVDESNTTRSFGPTRISARGQVGQICTSYWSEEDANVTCSELGYRGGV TTVYPATDSEPFLLTGIQCTGSERRLADCYTEVQICYDSGLRAGVVCFDRSEPVVHLEFKENDYGRVIIEVDGRNGTICN DQFNSLDAEVVCRQMGYVTGAEMHGPHMPINLPYVLANVQCTGSETSILSCKSDGWDMDNNCTSGEAAVFCYDSVRIALG QTNDEVSMGLVEVYQDRFWTTLCSTEFDKNDADVVCRQLGYPKSKVLLPGIFGRPYHALYTTSIRCHGNETSLLDCPHLI GSCRSYDYATIICIKDMVSDDMSLSLDNDVGGRVIATQYGIRGTVCRTGWDNRDARVVCRMYNYQGGQVYGTQEVTNRYR PVWVSDVQ |
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