Gene
| Gene Model ID | pfu_aug1.0_2205.1_01015 |
|---|---|
| Locus | scaffold2205.1 : 16440 ... 36835 : - |
| To GenomeBrowser | scaffold2205.1:16440..36835 |
| Genes list of scaffold | scaffold2205.1 |
| Synonym | pfu_aug2.0_71.1_03557 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2205.1_01015.t1 | 2 | 1 | Peptidase_C12 | 1 | 20 | 5.1e-21 | 74.8 | 4.6e-06 | 0.068 | 12.3 |
| pfu_aug1.0_2205.1_01015.t1 | 2 | 2 | Peptidase_C12 | 18 | 75 | 5.1e-21 | 74.8 | 4.5e-22 | 6.7e-18 | 64.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2205.1_01015.t1 | gi|260833566|ref|XP_002611728.1| | hypothetical protein BRAFLDRAFT_268698 [Branchiostoma floridae] | 1.0e-20 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 2 |
| maleGonad | 2 |
| mantle | 2 |
| pearlSac | 2 |
Transcript
| Transcript ID | pfu_aug1.0_2205.1_01015.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2205.1_01015.t1 atggtacccaaacctgttctggcagttgtgttgctttttccaatcaatgaaaaggcaccatccagagaagatgaagtgaa cacacattttgtagcttttgtccacaagaatggaaatctttatgaattagatggacgtaaggacgcccctactcaccatg gcactactactgcggatactctattagaggatgcaatagtagtggctaaaaaattcatggcgagggacccggagcaactt aactttactctgatggcactggcggtagcgcaatga |
|
Protein
| Protein ID | pfu_aug1.0_2205.1_01015.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2205.1_01015.t1 MVPKPVLAVVLLFPINEKAPSREDEVNTHFVAFVHKNGNLYELDGRKDAPTHHGTTTADTLLEDAIVVAKKFMARDPEQL NFTLMALAVAQ |
|