Gene
| Gene Model ID | pfu_aug1.0_2207.1_15727 |
|---|---|
| Locus | scaffold2207.1 : 14908 ... 21835 : - |
| To GenomeBrowser | scaffold2207.1:14908..21835 |
| Genes list of scaffold | scaffold2207.1 |
| Synonym | pfu_aug2.0_581.1_04358 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2207.1_15727.t1 | 10 | 1 | zf-C2H2_2 | 4 | 60 | 7.0e-10 | 38.9 | 6.3e-07 | 0.0016 | 18.5 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 1 | zf-C2H2 | 31 | 49 | 4.7e-19 | 67.5 | 0.0008 | 2.0 | 8.9 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 1 | zf-C2H2_4 | 32 | 49 | 3.6e-15 | 55.0 | 0.008 | 20.0 | 5.8 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 2 | zf-C2H2 | 64 | 85 | 4.7e-19 | 67.5 | 2.3e-05 | 0.057 | 13.7 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 2 | zf-C2H2_4 | 64 | 84 | 3.6e-15 | 55.0 | 0.00046 | 1.1 | 9.6 |
| pfu_aug1.0_2207.1_15727.t1 | 10 | 2 | zf-C2H2_2 | 66 | 137 | 7.0e-10 | 38.9 | 3.4e-05 | 0.083 | 13.0 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 3 | zf-C2H2 | 115 | 136 | 4.7e-19 | 67.5 | 0.019 | 46.0 | 4.6 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 3 | zf-C2H2_4 | 115 | 136 | 3.6e-15 | 55.0 | 0.001 | 2.5 | 8.6 |
| pfu_aug1.0_2207.1_15727.t1 | 10 | 3 | zf-C2H2_2 | 144 | 166 | 7.0e-10 | 38.9 | 0.0056 | 14.0 | 5.8 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 4 | zf-C2H2 | 146 | 168 | 4.7e-19 | 67.5 | 0.004 | 9.9 | 6.7 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 4 | zf-C2H2_4 | 146 | 168 | 3.6e-15 | 55.0 | 0.065 | 160.0 | 2.9 |
| pfu_aug1.0_2207.1_15727.t1 | 10 | 4 | zf-C2H2_2 | 147 | 230 | 7.0e-10 | 38.9 | 0.043 | 110.0 | 3.0 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 5 | zf-C2H2 | 174 | 194 | 4.7e-19 | 67.5 | 0.12 | 300.0 | 2.0 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 5 | zf-C2H2_4 | 174 | 184 | 3.6e-15 | 55.0 | 0.055 | 140.0 | 3.1 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 6 | zf-C2H2 | 210 | 232 | 4.7e-19 | 67.5 | 1.4e-06 | 0.0034 | 17.6 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 6 | zf-C2H2_4 | 210 | 232 | 3.6e-15 | 55.0 | 4.2e-06 | 0.01 | 16.0 |
| pfu_aug1.0_2207.1_15727.t1 | 10 | 5 | zf-C2H2_2 | 211 | 292 | 7.0e-10 | 38.9 | 1.0e-05 | 0.026 | 14.6 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 7 | zf-C2H2 | 259 | 283 | 4.7e-19 | 67.5 | 0.0012 | 2.9 | 8.3 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 7 | zf-C2H2_4 | 259 | 280 | 3.6e-15 | 55.0 | 0.28 | 680.0 | 1.0 |
| pfu_aug1.0_2207.1_15727.t1 | 10 | 6 | zf-C2H2_2 | 261 | 334 | 7.0e-10 | 38.9 | 4.0e-05 | 0.099 | 12.7 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 8 | zf-C2H2 | 312 | 332 | 4.7e-19 | 67.5 | 0.0051 | 12.0 | 6.4 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 8 | zf-C2H2_4 | 312 | 321 | 3.6e-15 | 55.0 | 0.2 | 500.0 | 1.4 |
| pfu_aug1.0_2207.1_15727.t1 | 10 | 7 | zf-C2H2_2 | 341 | 368 | 7.0e-10 | 38.9 | 0.056 | 140.0 | 2.6 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 9 | zf-C2H2 | 343 | 363 | 4.7e-19 | 67.5 | 0.0051 | 13.0 | 6.4 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 9 | zf-C2H2_4 | 344 | 364 | 3.6e-15 | 55.0 | 0.0041 | 10.0 | 6.7 |
| pfu_aug1.0_2207.1_15727.t1 | 10 | 8 | zf-C2H2_2 | 370 | 392 | 7.0e-10 | 38.9 | 0.21 | 520.0 | 0.8 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 10 | zf-C2H2 | 371 | 393 | 4.7e-19 | 67.5 | 5.8e-07 | 0.0014 | 18.8 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 10 | zf-C2H2_4 | 371 | 393 | 3.6e-15 | 55.0 | 0.003 | 7.5 | 7.1 |
| pfu_aug1.0_2207.1_15727.t1 | 10 | 9 | zf-C2H2_2 | 407 | 429 | 7.0e-10 | 38.9 | 0.021 | 51.0 | 4.0 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 11 | zf-C2H2 | 408 | 431 | 4.7e-19 | 67.5 | 2.7e-06 | 0.0067 | 16.6 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 11 | zf-C2H2_4 | 408 | 431 | 3.6e-15 | 55.0 | 4.2e-07 | 0.001 | 19.2 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 12 | zf-C2H2 | 441 | 451 | 4.7e-19 | 67.5 | 0.0047 | 12.0 | 6.5 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 12 | zf-C2H2_4 | 442 | 468 | 3.6e-15 | 55.0 | 0.0018 | 4.3 | 7.8 |
| pfu_aug1.0_2207.1_15727.t1 | 10 | 10 | zf-C2H2_2 | 466 | 495 | 7.0e-10 | 38.9 | 0.45 | 1100.0 | -0.3 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 13 | zf-C2H2 | 474 | 496 | 4.7e-19 | 67.5 | 0.0013 | 3.1 | 8.3 |
| pfu_aug1.0_2207.1_15727.t1 | 13 | 13 | zf-C2H2_4 | 474 | 496 | 3.6e-15 | 55.0 | 0.002 | 4.9 | 7.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2207.1_15727.t1 | gi|328719280|ref|XP_001943706.2| | 5.0e-28 |
Transcript
| Transcript ID | pfu_aug1.0_2207.1_15727.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2207.1_15727.t1 atggacggatttgtaatgcaacttcagcgccagatacgagacgtgacggatagccaagctatcatcagggacgacttaga cagtcaacaagtctgtgctgtctgttctgagcagtttgtgaattatactcagctaaaaatccatatcgtagcgtctggtc acgagcaggtggaagaagaagcgacaggttataaatgttttacgtgcagtaagtattttacacgatttgtcgatctggaa tatcacatggagctgacctatcatactggaaatcaggagacgaataaagaacgaaaagtggaaaaggtctgtgccaaagg tgttcagaaagaagtgaaaaacttcaagtgtagtgtttgtttgacagcttttaatactatagagaaatgcgagaagcaca tttcaaaggcaagttgcgagtcaaagaaacggaggaaatgtacgtgttgtgatatgtactttcagaaagagaacctgtta caagcccatatgtaccagtatcatagctacgactacccgtttaaatgtgatttctgtaccgcggagtttacgttgattgc cccattcatcattcatcgtacgtcacaccttcctggtcccgacaaaacatggagtcgagaacagatggaatgtcaaatct gtggaagaattttcacggagaagcatttactagaccgacacgtcaagaattcccatcttgccgatgatatgtctttagct ggtactgaaccggaggtcatcaacacgactggttcgttaactgactttacgtattttaaatgtttttcttgtgatttgta cttcgtaaattgccagagccttacactacatatgaaggaaactttacacacaggtttacctgaacaagagaaggaaatct cgatgacacggacaattatgagtaacgtgactgataaatcgatactcaaaccttatcgctgcactagatgccacaccgcc tttggaatgcaaaaaaatgcagaggaacatgttgccaaggcaacgtgtaagccgtactataaaaaaacttgtccgtgctg tccggaggttttctggactaaaaatctgtttgaagctcatctattggatcaacataaagatgaatacccgttcaaatgta aagattgtggtcaaatattctatcagctatctggactcatgacccatgctaaggtacatggcaacgaattagaagatgtt cgaccaaagggacttaactcctatccatgtcccatatgtcagaagttactgtcgagaaagtctgatatcaggcatcacat caataacgtgcacaaagggaagaacaagagcaaccccatcgtatgtgatatttgtggaaaatcttacgccagtgccaaag ccaaaagtaaagcgatgcttgactaccatcgcgcctcaaagcatacgatgggtgaccggttcagatgtgaggaatgcggg gcgggctttaagattaaaccacactatggtattcacatggcccagcactacattgacagaggcgatcttcagcaggcaaa aaactgctgtttaccagtgtattttacacagaagcttctgtttccagtatttgagtattttacacagaagcttctgttac cagtatttgtgtattttacacagaagcttctgttaccagtatttgtgtattttacacagaagcttctgttaccagtattt gtgtatttcacagatttatctgatgtttaccggtag |
|
Protein
| Protein ID | pfu_aug1.0_2207.1_15727.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2207.1_15727.t1 MDGFVMQLQRQIRDVTDSQAIIRDDLDSQQVCAVCSEQFVNYTQLKIHIVASGHEQVEEEATGYKCFTCSKYFTRFVDLE YHMELTYHTGNQETNKERKVEKVCAKGVQKEVKNFKCSVCLTAFNTIEKCEKHISKASCESKKRRKCTCCDMYFQKENLL QAHMYQYHSYDYPFKCDFCTAEFTLIAPFIIHRTSHLPGPDKTWSREQMECQICGRIFTEKHLLDRHVKNSHLADDMSLA GTEPEVINTTGSLTDFTYFKCFSCDLYFVNCQSLTLHMKETLHTGLPEQEKEISMTRTIMSNVTDKSILKPYRCTRCHTA FGMQKNAEEHVAKATCKPYYKKTCPCCPEVFWTKNLFEAHLLDQHKDEYPFKCKDCGQIFYQLSGLMTHAKVHGNELEDV RPKGLNSYPCPICQKLLSRKSDIRHHINNVHKGKNKSNPIVCDICGKSYASAKAKSKAMLDYHRASKHTMGDRFRCEECG AGFKIKPHYGIHMAQHYIDRGDLQQAKNCCLPVYFTQKLLFPVFEYFTQKLLLPVFVYFTQKLLLPVFVYFTQKLLLPVF VYFTDLSDVYR |
|