Gene
| Gene Model ID | pfu_aug1.0_2208.1_58825 |
|---|---|
| Locus | scaffold2208.1 : 13396 ... 21848 : + |
| To GenomeBrowser | scaffold2208.1:13396..21848 |
| Genes list of scaffold | scaffold2208.1 |
| Synonym | pfu_aug2.0_133.1_10328 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2208.1_58825.t1 | 1 | 1 | VWA | 18 | 198 | 1.4e-39 | 135.6 | 5.89947e-43 | 1.7e-39 | 135.3 |
| pfu_aug1.0_2208.1_58825.t1 | 1 | 1 | VWA_2 | 18 | 179 | 2.2e-14 | 53.9 | 9.1e-18 | 2.7e-14 | 53.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2208.1_58825.t1 | gi|260781661|ref|XP_002585922.1| | hypothetical protein BRAFLDRAFT_90332 [Branchiostoma floridae] | 7.0e-24 |
Transcript
| Transcript ID | pfu_aug1.0_2208.1_58825.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2208.1_58825.t1 atgaaatgggttgtttcacttcttgattattgtgatactgcattgctctccgatatagtattcctcgtcgacgaaagtgg aagtgttagtagaaatacctataataccaatcaaacaaattttgaaaaacaaatggacttcgttgcaacatttatttctg gttttaaaataggaaaggatggtgtacagatcggactagtaacattctcaactgacgtgaaaattgaatactatcttaac gaatatcatgatttacagactttactgcagaaaacaagtcaagtaggctacacccatcctggtcttacattaacaaatct gggcatggacacagtgagagaaaaggtgttttctttaagtcaaggtgacagaccgaacgcaaaaaatattctgataatta taacagatggagaatcaaatctccggacacttactgctatttcggcaaaacagcttcatgcatctaatgtaacagtgttc agtgtcggaattggtaacaccatcgatgtccaagaacttatatccattgcgtcggatcctgaaaatgtaatgacagttgg tgctttcagtaacctacagggaatcgttgatcatcttcaacaaaagctttgtacagatgccttattacatcgtcggaaac ccacgatctcttctccgctgcgctacgcaagatgccctgggttaccttattatattaaattggttttaagttag |
|
Protein
| Protein ID | pfu_aug1.0_2208.1_58825.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2208.1_58825.t1 MKWVVSLLDYCDTALLSDIVFLVDESGSVSRNTYNTNQTNFEKQMDFVATFISGFKIGKDGVQIGLVTFSTDVKIEYYLN EYHDLQTLLQKTSQVGYTHPGLTLTNLGMDTVREKVFSLSQGDRPNAKNILIIITDGESNLRTLTAISAKQLHASNVTVF SVGIGNTIDVQELISIASDPENVMTVGAFSNLQGIVDHLQQKLCTDALLHRRKPTISSPLRYARCPGLPYYIKLVLS |
|