Gene
| Gene Model ID | pfu_aug1.0_2210.1_30020 |
|---|---|
| Locus | scaffold2210.1 : 23093 ... 28235 : - |
| To GenomeBrowser | scaffold2210.1:23093..28235 |
| Genes list of scaffold | scaffold2210.1 |
| Synonym | pfu_aug2.0_83.1_10251 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2210.1_30020.t1 | 1 | 1 | PIF1 | 521 | 743 | 1.6e-26 | 93.1 | 1.2e-29 | 2.6e-26 | 92.4 |
| pfu_aug1.0_2210.1_30020.t1 | 1 | 1 | AAA_30 | 522 | 752 | 1.4e-08 | 34.5 | 5.8e-11 | 1.2e-07 | 31.4 |
Transcript
| Transcript ID | pfu_aug1.0_2210.1_30020.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2210.1_30020.t1 atgttgttatggatagaaaatgcccctaaaacttcatcgcattcttatgacgaaatatcttcattcatagacagtcatgt gacctgcaagaaggatgaaagcatggtcaatttggtaaattatcaaacccacagacatgcctctacctgtcgtaagaaag gacaaccaatatgtcgctttggctttccactgcctcctattgacaagacaatgattttagatagcttaccaaaatcacac aaaaaatttgaagcttcggtaataaattgtaacaaagttgcaacatttctagagtctatgaaattaggtgacaatattca aatgtccttcgctcaatttctgacatctttgggtttaagttatgaagaatatttgttagctattagatcagatattccac aaggaaaatcaaaagtgtttatgaatagactagtttctgaaatacgcattaataattacaacgaaacacttctccgaagt tgggaggcaaatatggatattcagttcattttggacccttacgcatgtgctacatacattgtctcatacatatcaaaggg tcaaaggggtatgtcacagttgctaggtcaagcctgtaaggaagcaaaaaaagatccagacattcggcagcaggtacgca cgattggaaacaaattcctttctcatgtagagattggcagtcaagaagcagcctatattttactccaaatgccattaagg aggtcttcccgtgaagtagtttttatcaatactttgccagaagaagaacgtgttgttcttgtaaaatcatttactgatct gaaaaatctacccccagattcaacatctattgaagctgataataacatcaaacgctatcagcgaaggccaaagacaatgg aaaactgctgtttggcagattatgttgcattgtataatgtaaagtatacaaaaggaaaacctaaaaatgtttctagtaac attgatatggagttgcctgaagcagattatgcagaagacacatgtgatgatccttcgagtataacagacaatgatgatga atttccagaagaacactttgctcgtgatggagctattattgttaagaggagaaaggcaagatgcatatattcttgtggtt acagcaaagaacttgatcctgaaaactattatagggagttgattatgctttatttgccttggcgagatttaaataatctt aaaagcagctttccaacatacgaggatcagtatgacaaatttcaggaatctattgatgagaagaaaagagagtatgtttc tgattgtgaaataaatatgtcattattaagagaagacctggaggattctggtgaccctggtatagcaatatctgaaatgc aacaccaagaagaacaagatattcaaacagggactcgaacttgcaaagaccttggctgttttgatccaaaagatggtgat cttgatacaagttatgacttgggacttgacttaggtgtaggcagaaaacaaatattgcaacatgatgaacaattacagaa tgaattgaatgatcgagactacaggtgcatggtgcaaagtctgaatttgaaacaaaaagagtttttccatcatgtgttgc attggcacaaaactcgcacagagcctttattcaattttttaagtggaggtgctggagttggcaaaagtgttttacttaaa gcattgtaccaatcattaattaaattttattctcatgaagttggtaataatcctgatgaattaaacgttttaatatgtgc acctactggtaaggctgcttatcaagtaggtggtcttactattcattcagccttttgtataccagctgagcaaggccttg catacaaaccattagacatgcaccagttaagctcttttcagttgaagttcaagtctttaaaagttgttttcatagatgaa atatctatggttggtcgtaaaatgtttaattttataaacctacgccttcaggaaataatgggttgtctaaaaccttttgg tggtgtctctgttattgcatttgaagatttgtaccagttaaagcctgtgatggattcatggattttttcaaattgcacca gaacagatagtatagagatgcttgctacaaatctttggactgaatatttcagtatttttgagttggatgaaatcatgaga caacgaaatgatctcaaatttgctcaattgttgaatcgtttaagagaaggcattcaaacacaagaggatattgaaatatt aaagcgtagatcgttatgccaaactgttgcagatacttcatgtatgccccacctgtatacgaccaggaaagaagtagctt atcataacctgtctttgtttgagaatgtagcttcagaaaagaaaacaaccgtacaagctattgatgttgtttcaggcaac tttcctgaacatttgaaacaatctttgatctcaaggattcctgatgatccatcaaaaacaaagggttag |
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Protein
| Protein ID | pfu_aug1.0_2210.1_30020.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2210.1_30020.t1 MLLWIENAPKTSSHSYDEISSFIDSHVTCKKDESMVNLVNYQTHRHASTCRKKGQPICRFGFPLPPIDKTMILDSLPKSH KKFEASVINCNKVATFLESMKLGDNIQMSFAQFLTSLGLSYEEYLLAIRSDIPQGKSKVFMNRLVSEIRINNYNETLLRS WEANMDIQFILDPYACATYIVSYISKGQRGMSQLLGQACKEAKKDPDIRQQVRTIGNKFLSHVEIGSQEAAYILLQMPLR RSSREVVFINTLPEEERVVLVKSFTDLKNLPPDSTSIEADNNIKRYQRRPKTMENCCLADYVALYNVKYTKGKPKNVSSN IDMELPEADYAEDTCDDPSSITDNDDEFPEEHFARDGAIIVKRRKARCIYSCGYSKELDPENYYRELIMLYLPWRDLNNL KSSFPTYEDQYDKFQESIDEKKREYVSDCEINMSLLREDLEDSGDPGIAISEMQHQEEQDIQTGTRTCKDLGCFDPKDGD LDTSYDLGLDLGVGRKQILQHDEQLQNELNDRDYRCMVQSLNLKQKEFFHHVLHWHKTRTEPLFNFLSGGAGVGKSVLLK ALYQSLIKFYSHEVGNNPDELNVLICAPTGKAAYQVGGLTIHSAFCIPAEQGLAYKPLDMHQLSSFQLKFKSLKVVFIDE ISMVGRKMFNFINLRLQEIMGCLKPFGGVSVIAFEDLYQLKPVMDSWIFSNCTRTDSIEMLATNLWTEYFSIFELDEIMR QRNDLKFAQLLNRLREGIQTQEDIEILKRRSLCQTVADTSCMPHLYTTRKEVAYHNLSLFENVASEKKTTVQAIDVVSGN FPEHLKQSLISRIPDDPSKTKG |
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